RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 WHAMMP3Q1A5X7 153 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 C1orf53Q5VUE5 145 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 FAM117BQ6P1L5 589 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 C11orf74Q86VG3 221 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 RAB11FIP4Q86YS3 637 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 PHACTR4Q8IZ21 702 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 ALDH16A1Q8IZ83 802 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 MARCH10Q8NA82 808 aaPredicted RBP4.4□□□□□ -1.71
RDH11-204ENST00000553578 FAM76AQ8TAV0 307 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 ZDHHC1Q8WTX9 485 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 CCDC74AQ96AQ1 378 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 RBM41Q96IZ5 413 aaKnown RBP4.4□□□□□ -1.71
RDH11-204ENST00000553578 ALS2CR12Q96Q35 445 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 ZCCHC2Q9C0B9 1178 aaKnown RBP4.4□□□□□ -1.71
RDH11-204ENST00000553578 KCNF1Q9H3M0 494 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 RHBDL2Q9NX52 303 aa4.4□□□□□ -1.71
RDH11-204ENST00000553578 ATXN7L1Q9ULK2 861 aaPredicted RBP4.4□□□□□ -1.71
RDH11-204ENST00000553578 COL2A1P02458 1487 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 GOLGA6L4A6NEF3 574 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TRIM64CA6NLI5 447 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 SLC27A2O14975 620 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ZEB2O60315 1214 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 NEMFO60524 1076 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 VIMP08670 466 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 MAP3K10Q02779 954 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 KRT72Q14CN4 511 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CWF19L1Q69YN2 538 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 ITPRIPL1Q6GPH6 555 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 RCSD1Q6JBY9 416 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CUL5Q93034 780 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 NSUN5Q96P11 429 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 CSRNP1Q96S65 589 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ZIC5Q96T25 663 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TBCBQ99426 244 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ARMT1Q9H993 441 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 SSU72Q9NP77 194 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 C9orf78Q9NZ63 289 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 C6orf203Q9P0P8 240 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 EGFL7Q9UHF1 273 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ARHGAP26Q9UNA1 814 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ZDHHC9Q9Y397 364 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 PAPPA2Q9BXP8 1791 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TCRBV5S4A2TA0A5A2 114 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 DCDC2BA2VCK2 349 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 H3BRJ5 948 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 hCG_1984214I3L0E3 225 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 EYA2O00167 538 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 PMM2O15305 246 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 AHCYL1O43865 530 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 MTA2O94776 668 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 NTSR2O95665 410 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 BMP4P12644 408 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 H2AFXP16104 143 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 ZFXP17010 805 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 ATP4AP20648 1035 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CLK1P49759 484 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 RENBPP51606 427 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 SNX16P57768 344 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 EXOSC10Q01780 885 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 TAF5Q15542 800 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 PKN1Q16512 942 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CWF19L2Q2TBE0 894 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 ZMYM1Q5SVZ6 1142 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 AGAP9Q5VTM2 703 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TCERG1LQ5VWI1 586 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 KIAA1211LQ6NV74 962 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 NEK10Q6ZWH5 1172 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CNNM3Q8NE01 707 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 MFSD3Q96ES6 412 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TTC1Q99614 292 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CFHR5Q9BXR6 569 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TNMDQ9H2S6 317 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CAAP1Q9H8G2 361 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ARNT2Q9HBZ2 717 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 HAUS2Q9NVX0 235 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 QPCTLQ9NXS2 382 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 IFT80Q9P2H3 777 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 NAV1Q8NEY1 1877 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 UBN2Q6ZU65 1347 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 MROH5Q6ZUA9 1318 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 LINC00854A0A1B0GVQ3 168 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 ZSCAN12O43309 604 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TOM1O60784 492 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 STARD3NLO95772 234 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 NOVP48745 357 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 YARSP54577 528 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 SNCBQ16143 134 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 CCDC152Q4G0S7 254 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 NOL9Q5SY16 702 aaKnown RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 CCSAPQ6IQ19 270 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 PPFIBP1Q86W92 1011 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 TTC5Q8N0Z6 440 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 SH2D3CQ8N5H7 860 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 GABPB2Q8TAK5 448 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 HSH2DQ96JZ2 352 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 FGD4Q96M96 766 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 C2orf49Q9BVC5 232 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 OXCT2Q9BYC2 517 aaPredicted RBP4.39□□□□□ -1.71
RDH11-204ENST00000553578 BATF3Q9NR55 127 aa4.39□□□□□ -1.71
RDH11-204ENST00000553578 RTEL1Q9NZ71 1219 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms