RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 DRP2Q13474 957 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 SMAD4Q13485 552 aaKnown RBP16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 ME3Q16798 604 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 ANO5Q75V66 913 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 MICAL1Q8TDZ2 1067 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 CASD1Q96PB1 797 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 POP1Q99575 1024 aaKnown RBP16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 MRPL9Q9BYD2 267 aaKnown RBP16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 CWH43Q9H720 699 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 GJB4Q9NTQ9 266 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 SUCLA2Q9P2R7 463 aaPredicted RBP16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 PUF60Q9UHX1 559 aaKnown RBP16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 CD207Q9UJ71 328 aa16.95■□□□□ 0.3
SDR39U1-205ENST00000553546 A0A087WZ62 844 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 MBTPS2O43462 519 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 GAS2O43903 313 aaKnown RBP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 RFC5P40937 340 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 NRIP1P48552 1158 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 NEK4P51957 841 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 POLGP54098 1239 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 PLCB3Q01970 1234 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 DLX2Q07687 328 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 TRIM29Q14134 588 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 EPHA7Q15375 998 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 SMAD2Q15796 467 aaKnown RBP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 OTUD6AQ7L8S5 288 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 ADGRD2Q7Z7M1 963 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 RHPN2Q8IUC4 686 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 C4orf19Q8IY42 314 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 NECAB1Q8N987 351 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 RNF169Q8NCN4 708 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 ZNF558Q96NG5 402 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 CDCA3Q99618 268 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 SH2D3AQ9BRG2 576 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 FDXACB1Q9BRP7 624 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 TRAIPQ9BWF2 469 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 RNF19AQ9NV58 838 aa16.94■□□□□ 0.3
SDR39U1-205ENST00000553546 CARNS1A5YM72 827 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 LINC01565O15544 149 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 ALADP13716 330 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 FGFR4P22455 802 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 ZP2Q05996 745 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 NR5A1Q13285 461 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 PLA2G4FQ68DD2 849 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 ZNF598Q86UK7 904 aaKnown RBP16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 NSUN7Q8NE18 718 aaKnown RBP16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 MRPS27Q92552 414 aaKnown RBP16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 HAS1Q92839 578 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 CEP170P1Q96L14 293 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 FBXL18Q96ME1 805 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 NLRP4Q96MN2 994 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 LXNQ9BS40 222 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 ZSWIM4Q9H7M6 989 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 TLE6Q9H808 572 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 HCSTQ9UBK5 93 aa16.93■□□□□ 0.3
SDR39U1-205ENST00000553546 LARGE1O95461 756 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 SRGAP2BP0DMP2 458 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 PHKA2P46019 1235 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 RAB27AP51159 221 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 KRT17Q04695 432 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 CLUL1Q15846 466 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 CLLU1OSQ5K130 101 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 TWF2Q6IBS0 349 aaKnown RBP16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 NCAPH2Q6IBW4 605 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 KCNT2Q6UVM3 1135 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 CATSPER4Q7RTX7 472 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 TCP11Q8WWU5 503 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 PSPC1Q8WXF1 523 aaKnown RBP16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 TNFRSF25Q93038 417 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 MSLNLQ96KJ4 702 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 DHX33Q9H6R0 707 aaKnown RBP16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 PIN4Q9Y237 131 aaKnown RBP16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 COL4A3BPQ9Y5P4 624 aa16.92■□□□□ 0.3
SDR39U1-205ENST00000553546 C19orf67A6NJJ6 358 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 FSCN2O14926 492 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 CSDE1O75534 798 aaKnown RBP16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 EYA4O95677 639 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 ATF7P17544 494 aaPredicted RBP16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 YWHABP31946 246 aaKnown RBP16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 NPEPPSP55786 919 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 SPIRE1Q08AE8 756 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 COASYQ13057 564 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 EARS2Q5JPH6 523 aaKnown RBP16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 LRRC55Q6ZSA7 311 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 SRGAP1Q7Z6B7 1085 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 RBM23Q86U06 439 aaKnown RBP16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 SMRP1Q8NCR6 262 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 HELQQ8TDG4 1101 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 ARID2Q68CP9 1835 aa16.91■□□□□ 0.3
SDR39U1-205ENST00000553546 FAM205CA6NFA0 338 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 ASAP2O43150 1006 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 DTNBO60941 627 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 ERVFC1P60507 584 aa16.9■□□□□ 0.3
SDR39U1-205ENST00000553546 CALCRLQ16602 461 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms