RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 TIPINQ9BVW5 301 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 ACAD9Q9H845 621 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 ARHGAP20Q9P2F6 1191 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 LARSQ9P2J5 1176 aaKnown RBP16.78■□□□□ 0.28
ABCD4-218ENST00000553486 CDC23Q9UJX2 597 aa16.78■□□□□ 0.28
ABCD4-218ENST00000553486 SSU72P8A0A1W2PR75 194 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 USO1O60763 962 aaKnown RBP16.77■□□□□ 0.28
ABCD4-218ENST00000553486 NOL4O94818 638 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 LCA5LO95447 670 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 PSMC2P35998 433 aaKnown RBP16.77■□□□□ 0.28
ABCD4-218ENST00000553486 RARRES1P49788 294 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 VAV2P52735 878 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 PSMC5P62195 406 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 KCNA1Q09470 495 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 ZC2HC1CQ53FD0 456 aaPredicted RBP16.77■□□□□ 0.28
ABCD4-218ENST00000553486 TXLNBQ8N3L3 684 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 LRRN4CLQ8ND94 238 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 MKNK1Q9BUB5 465 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 HTATIP2Q9BUP3 242 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 PAK6Q9NQU5 681 aaPredicted RBP16.77■□□□□ 0.28
ABCD4-218ENST00000553486 ZMYM2Q9UBW7 1377 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 WDR81Q562E7 1941 aa16.77■□□□□ 0.28
ABCD4-218ENST00000553486 TRIOBPQ9H2D6 2365 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 AKR1B10O60218 316 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 ATP9AO75110 1047 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 FARP2O94887 1054 aaPredicted RBP16.77■□□□□ 0.27
ABCD4-218ENST00000553486 KIF11P52732 1056 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 POLR2FP61218 127 aaKnown RBP16.77■□□□□ 0.27
ABCD4-218ENST00000553486 IRX3P78415 501 aaPredicted RBP16.77■□□□□ 0.27
ABCD4-218ENST00000553486 KIF5AQ12840 1032 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 MAPK7Q13164 816 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 MAPK8IP2Q13387 824 aaPredicted RBP16.77■□□□□ 0.27
ABCD4-218ENST00000553486 ZNF746Q6NUN9 644 aaPredicted RBP16.77■□□□□ 0.27
ABCD4-218ENST00000553486 CEP112Q8N8E3 955 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 DEFB118Q96PH6 123 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 PURBQ96QR8 312 aaKnown RBP16.77■□□□□ 0.27
ABCD4-218ENST00000553486 SENP7Q9BQF6 1050 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 GBP3Q9H0R5 595 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 NLRC4Q9NPP4 1024 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 PLCB1Q9NQ66 1216 aa16.77■□□□□ 0.27
ABCD4-218ENST00000553486 STAM2O75886 525 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 PLEKP08567 350 aaPredicted RBP16.76■□□□□ 0.27
ABCD4-218ENST00000553486 YWHABP31946 246 aaKnown RBP16.76■□□□□ 0.27
ABCD4-218ENST00000553486 PLS1Q14651 629 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 FAM186BQ8IYM0 893 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 CDHR1Q96JP9 859 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 ANKEF1Q9NU02 776 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 MORF4L1Q9UBU8 362 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 TRIM10Q9UDY6 481 aa16.76■□□□□ 0.27
ABCD4-218ENST00000553486 SPDYE16A6NNV3 312 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 DKC1O60832 514 aaKnown RBP eCLIP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 SERPING1P05155 500 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 CASP4P49662 377 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 EXOC3L4Q17RC7 722 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 DCAF17Q5H9S7 520 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 TCERG1LQ5VWI1 586 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 DAW1Q8N136 415 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 INPP4AQ96PE3 977 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 STRA6Q9BX79 667 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 IFIH1Q9BYX4 1025 aaKnown RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 GANQ9H2C0 597 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 CYP39A1Q9NYL5 469 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 GJD2Q9UKL4 321 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 FRMD4BQ9Y2L6 1034 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 PCDHA13Q9Y5I0 950 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 GTPBP10A4D1E9 387 aaKnown RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 K7ENM7 598 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 PPP1R37O75864 691 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 CAPN2P17655 700 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 TUBB4BP68371 445 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 GBP6Q6ZN66 633 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 SLC9A9Q8IVB4 645 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 SLC17A8Q8NDX2 589 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 CHST13Q8NET6 341 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 BORCS6Q96GS4 357 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 DRC1Q96MC2 740 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 MOV10L1Q9BXT6 1211 aaKnown RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 TMEM206Q9H813 350 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 A1CFQ9NQ94 594 aaKnown RBP16.75■□□□□ 0.27
ABCD4-218ENST00000553486 AGPAT3Q9NRZ7 376 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 DMAC2Q9NW81 257 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 AIPL1Q9NZN9 384 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 PCDHA10Q9Y5I2 948 aa16.75■□□□□ 0.27
ABCD4-218ENST00000553486 CCNE2O96020 404 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 TFRCP02786 760 aaKnown RBP16.74■□□□□ 0.27
ABCD4-218ENST00000553486 HMGCRP04035 888 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 PLS3P13797 630 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 WHAMMP3Q1A5X7 153 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
ABCD4-218ENST00000553486 HGSNATQ68CP4 663 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 MAEAQ7L5Y9 396 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 SRGAP1Q7Z6B7 1085 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
ABCD4-218ENST00000553486 GOLGA1Q92805 767 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 SLC35C1Q96A29 364 aa16.74■□□□□ 0.27
ABCD4-218ENST00000553486 LACRTQ9GZZ8 138 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms