RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TFDP1Q14186 410 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 BECN1Q14457 450 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 TMEM119Q4V9L6 283 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 SLC24A5Q71RS6 500 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 RNF149Q8NC42 400 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 POLR3FQ9H1D9 316 aaPredicted RBP20.5■□□□□ 0.87
CPSF2-202ENST00000553427 CHST12Q9NRB3 414 aa20.5■□□□□ 0.87
CPSF2-202ENST00000553427 SRPRBQ9Y5M8 271 aaKnown RBP20.5■□□□□ 0.87
CPSF2-202ENST00000553427 LCHNA4D1U4 455 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 F13A1P00488 732 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 STAG3L1P0CL83 205 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 GLRA2P23416 452 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 PTENP60484 403 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 FAM189BP81408 668 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 GRB10Q13322 594 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 CAPSQ13938 189 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 SLC39A14Q15043 492 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 FAM117BQ6P1L5 589 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 CABP7Q86V35 215 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 ASAP3Q8TDY4 903 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 ZNF396Q96N95 335 aaPredicted RBP20.49■□□□□ 0.87
CPSF2-202ENST00000553427 PNMA5Q96PV4 448 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 YME1L1Q96TA2 773 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 TRAIPQ9BWF2 469 aa20.49■□□□□ 0.87
CPSF2-202ENST00000553427 ELAC1Q9H777 363 aaKnown RBP20.49■□□□□ 0.87
CPSF2-202ENST00000553427 FBXO2Q9UK22 296 aaPredicted RBP20.49■□□□□ 0.87
CPSF2-202ENST00000553427 ARHGEF15O94989 841 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 UPP2O95045 317 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 SRGAP2CP0DJJ0 459 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 ZSCAN20P17040 1043 aaPredicted RBP20.48■□□□□ 0.87
CPSF2-202ENST00000553427 UBA7P41226 1012 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 GRIN1Q05586 938 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 GRIN2CQ14957 1233 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 KCNK18Q7Z418 384 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 ZNF689Q96CS4 500 aaPredicted RBP20.48■□□□□ 0.87
CPSF2-202ENST00000553427 FAM161BQ96MY7 647 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 CDX2Q99626 313 aaPredicted RBP20.48■□□□□ 0.87
CPSF2-202ENST00000553427 CCSER1Q9C0I3 900 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 AGPAT5Q9NUQ2 364 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 DACT1Q9NYF0 836 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 TRANK1O15050 2925 aa20.48■□□□□ 0.87
CPSF2-202ENST00000553427 MYH15Q9Y2K3 1946 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 LINC01553A4QN01 128 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 E9PMD0 336 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 DGKIO75912 1065 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 PKP1Q13835 747 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 CDCA2Q69YH5 1023 aaPredicted RBP20.47■□□□□ 0.87
CPSF2-202ENST00000553427 ATL3Q6DD88 541 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 CATSPER4Q7RTX7 472 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 SPRYD3Q8NCJ5 442 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 KIFAP3Q92845 792 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 CDK5RAP3Q96JB5 506 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 TIPINQ9BVW5 301 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 MINDY3Q9H8M7 445 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 GPRC5CQ9NQ84 441 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 TMEM161AQ9NX61 479 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 STXBP5LQ9Y2K9 1186 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 ADGRA3Q8IWK6 1321 aa20.47■□□□□ 0.87
CPSF2-202ENST00000553427 CSDE1O75534 798 aaKnown RBP20.46■□□□□ 0.87
CPSF2-202ENST00000553427 YEATS4O95619 227 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 FGFR4P22455 802 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 MARCKSP29966 332 aaPredicted RBP20.46■□□□□ 0.87
CPSF2-202ENST00000553427 ERVK-21P61565 698 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 FAM102BQ5T8I3 360 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 CMTR2Q8IYT2 770 aaKnown RBP20.46■□□□□ 0.87
CPSF2-202ENST00000553427 LINC00301Q8NCQ3 95 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 CALML4Q96GE6 196 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 SAMD11Q96NU1 681 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 CSRNP2Q9H175 543 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 KCND2Q9NZV8 630 aa20.46■□□□□ 0.87
CPSF2-202ENST00000553427 A0A0U1RQF3 1178 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 BRD1O95696 1058 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 GUCY2CP25092 1073 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 NAMPTP43490 491 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 MBTD1Q05BQ5 628 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 PPP2R5AQ15172 486 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 C1orf186Q6ZWK4 172 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 SYT2Q8N9I0 419 aaPredicted RBP20.45■□□□□ 0.86
CPSF2-202ENST00000553427 KRI1Q8N9T8 703 aaKnown RBP20.45■□□□□ 0.86
CPSF2-202ENST00000553427 TGS1Q96RS0 853 aaKnown RBP20.45■□□□□ 0.86
CPSF2-202ENST00000553427 LRFN2Q9ULH4 789 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 PIN4Q9Y237 131 aaKnown RBP20.45■□□□□ 0.86
CPSF2-202ENST00000553427 PCDHB7Q9Y5E2 793 aa20.45■□□□□ 0.86
CPSF2-202ENST00000553427 PPP6R2O75170 966 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 SKIP12755 728 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 AXLP30530 894 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 SLC12A3P55017 1021 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 CEBPZQ03701 1054 aaKnown RBP20.44■□□□□ 0.86
CPSF2-202ENST00000553427 STK38Q15208 465 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 ZRSR1Q15695 479 aaKnown RBP20.44■□□□□ 0.86
CPSF2-202ENST00000553427 RINT1Q6NUQ1 792 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 MAEAQ7L5Y9 396 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 ECHDC2Q86YB7 292 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 RSPH1Q8WYR4 309 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 CCDC51Q96ER9 411 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 RUSC1Q9BVN2 902 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 C2orf40Q9H1Z8 148 aa20.44■□□□□ 0.86
CPSF2-202ENST00000553427 HOXA2O43364 376 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 EOMESO95936 686 aa20.43■□□□□ 0.86
CPSF2-202ENST00000553427 PLA2G4BP0C869 781 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms