RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 KRT2P35908 639 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 AK2P54819 239 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 BMS1Q14692 1282 aaKnown RBP14.29□□□□□ -0.12
LINC00643-202ENST00000553426 TWF2Q6IBS0 349 aaKnown RBP14.29□□□□□ -0.12
LINC00643-202ENST00000553426 KCNT2Q6UVM3 1135 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 OTUD6AQ7L8S5 288 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 ADGRD2Q7Z7M1 963 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 ALYREFQ86V81 257 aaKnown RBP14.29□□□□□ -0.12
LINC00643-202ENST00000553426 SLFN12Q8IYM2 578 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 MRPS27Q92552 414 aaKnown RBP14.29□□□□□ -0.12
LINC00643-202ENST00000553426 CASD1Q96PB1 797 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 SH2D3AQ9BRG2 576 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 CWH43Q9H720 699 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 KCNMB3Q9NPA1 279 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 NGRNQ9NPE2 291 aaKnown RBP14.29□□□□□ -0.12
LINC00643-202ENST00000553426 ENTPD7Q9NQZ7 604 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 CYP26B1Q9NR63 512 aa14.29□□□□□ -0.12
LINC00643-202ENST00000553426 A0A087WZ62 844 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 TMEM150BA6NC51 233 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 CSDE1O75534 798 aaKnown RBP14.28□□□□□ -0.12
LINC00643-202ENST00000553426 FGFR4P22455 802 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 ALDH7A1P49419 539 aaKnown RBP14.28□□□□□ -0.12
LINC00643-202ENST00000553426 POLGP54098 1239 aaPredicted RBP14.28□□□□□ -0.12
LINC00643-202ENST00000553426 DRP2Q13474 957 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 FNDC1Q4ZHG4 1894 aaPredicted RBP14.28□□□□□ -0.12
LINC00643-202ENST00000553426 ANO5Q75V66 913 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 CATSPER4Q7RTX7 472 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 CEP170P1Q96L14 293 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 FDXACB1Q9BRP7 624 aaPredicted RBP14.28□□□□□ -0.12
LINC00643-202ENST00000553426 SPG21Q9NZD8 308 aa14.28□□□□□ -0.12
LINC00643-202ENST00000553426 PIN4Q9Y237 131 aaKnown RBP14.28□□□□□ -0.12
LINC00643-202ENST00000553426 WDR81Q562E7 1941 aa14.27□□□□□ -0.12
LINC00643-202ENST00000553426 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.12
LINC00643-202ENST00000553426 C19orf67A6NJJ6 358 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 PRR33A8MZF0 331 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 EML1O00423 815 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 PER2O15055 1255 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 STBD1O95210 358 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 EYA4O95677 639 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 RFC5P40937 340 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 RAB27AP51159 221 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 COASYQ13057 564 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 TRIM29Q14134 588 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 EPHA7Q15375 998 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 PLA2G4FQ68DD2 849 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 HELQQ8TDG4 1101 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 OXER1Q8TDS5 423 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 MSLNLQ96KJ4 702 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 NLRP4Q96MN2 994 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 TCF25Q9BQ70 676 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 HCSTQ9UBK5 93 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 VAV3Q9UKW4 847 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 COL4A3BPQ9Y5P4 624 aa14.27□□□□□ -0.13
LINC00643-202ENST00000553426 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
LINC00643-202ENST00000553426 YWHABP31946 246 aaKnown RBP14.26□□□□□ -0.13
LINC00643-202ENST00000553426 PHKA2P46019 1235 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 NEK4P51957 841 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 ERVFC1P60507 584 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 DUSP6Q16828 381 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 CLLU1OSQ5K130 101 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 PLPP4Q5VZY2 271 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 GLB1LQ6UWU2 654 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 LRRC55Q6ZSA7 311 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 TMC7Q7Z402 723 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 POTEDQ86YR6 584 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 C4orf19Q8IY42 314 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 TMEM87AQ8NBN3 555 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 SMRP1Q8NCR6 262 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 TCP11Q8WWU5 503 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
LINC00643-202ENST00000553426 GTF3C6Q969F1 213 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 CCDC43Q96MW1 224 aaKnown RBP14.26□□□□□ -0.13
LINC00643-202ENST00000553426 CEP89Q96ST8 783 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 LXNQ9BS40 222 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 TRAIPQ9BWF2 469 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 GJB4Q9NTQ9 266 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 RNF19AQ9NV58 838 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 CLEC1BQ9P126 229 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 BARX2Q9UMQ3 279 aaPredicted RBP14.26□□□□□ -0.13
LINC00643-202ENST00000553426 PCDHGC5Q9Y5F6 944 aa14.26□□□□□ -0.13
LINC00643-202ENST00000553426 FSCN2O14926 492 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 ASAP2O43150 1006 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 CTDNEP1O95476 244 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 CA8P35219 290 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 NPEPPSP55786 919 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 SMC1AQ14683 1233 aaKnown RBP14.25□□□□□ -0.13
LINC00643-202ENST00000553426 ME3Q16798 604 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 XKR9Q5GH70 373 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 ZNF598Q86UK7 904 aaKnown RBP14.25□□□□□ -0.13
LINC00643-202ENST00000553426 NECAB1Q8N987 351 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 PRPF31Q8WWY3 499 aaKnown RBP14.25□□□□□ -0.13
LINC00643-202ENST00000553426 HAS1Q92839 578 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 PGBD4Q96DM1 585 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 TMEM169Q96HH4 297 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 FAM105AQ9NUU6 356 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 PCDHA12Q9UN75 941 aa14.25□□□□□ -0.13
LINC00643-202ENST00000553426 WDFY4Q6ZS81 3184 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms