RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 COL4A3BPQ9Y5P4 624 aa14.48□□□□□ -0.09
ACTN1-207ENST00000553290 WNT7AO00755 349 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 ASAP2O43150 1006 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 CSDE1O75534 798 aaKnown RBP14.47□□□□□ -0.09
ACTN1-207ENST00000553290 ITGB1P05556 798 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 ATP2B1P20020 1258 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 MCM7P33993 719 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 GNL2Q13823 731 aaKnown RBP14.47□□□□□ -0.09
ACTN1-207ENST00000553290 CSPP1Q1MSJ5 1256 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 SPPL3Q8TCT6 385 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 PRPF31Q8WWY3 499 aaKnown RBP14.47□□□□□ -0.09
ACTN1-207ENST00000553290 PSPC1Q8WXF1 523 aaKnown RBP14.47□□□□□ -0.09
ACTN1-207ENST00000553290 PABPC5Q96DU9 382 aaKnown RBP14.47□□□□□ -0.09
ACTN1-207ENST00000553290 NLRP4Q96MN2 994 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 TRAIPQ9BWF2 469 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 ANKEF1Q9NU02 776 aa14.47□□□□□ -0.09
ACTN1-207ENST00000553290 TYW1Q9NV66 732 aaKnown RBP14.47□□□□□ -0.09
ACTN1-207ENST00000553290 ARID2Q68CP9 1835 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 ZBTB39O15060 712 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 FGFR1P11362 822 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 SKIP12755 728 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 KCNA5P22460 613 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 TRAPPC10P48553 1259 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 COL19A1Q14993 1142 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 EMC2Q15006 297 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 LEXMQ3ZCV2 418 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 CATSPER4Q7RTX7 472 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 NOSTRINQ8IVI9 506 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 KSR1Q8IVT5 923 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 ABI1Q8IZP0 508 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 PPP2R3CQ969Q6 453 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 TMEM143Q96AN5 459 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 CASD1Q96PB1 797 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 TMEM60Q9H2L4 133 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 IFT122Q9HBG6 1241 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 KIF3AQ9Y496 699 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 ATG2AQ2TAZ0 1938 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 NCOR1O75376 2440 aa14.46□□□□□ -0.09
ACTN1-207ENST00000553290 MYO7AQ13402 2215 aa14.46□□□□□ -0.1
ACTN1-207ENST00000553290 SRGAP2CP0DJJ0 459 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 LAG3P18627 525 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 UBE3AQ05086 875 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 LAMTOR4Q0VGL1 99 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 CAMK1Q14012 370 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 PUS10Q3MIT2 529 aaKnown RBP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 TWF2Q6IBS0 349 aaKnown RBP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 SRGAP1Q7Z6B7 1085 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 ZNF598Q86UK7 904 aaKnown RBP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 COLGALT1Q8NBJ5 622 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 RNF169Q8NCN4 708 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 RSPH1Q8WYR4 309 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 CCDC43Q96MW1 224 aaKnown RBP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 MTRQ99707 1265 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 CWH43Q9H720 699 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 RNF19AQ9NV58 838 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 NOL7Q9UMY1 257 aaKnown RBP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 PIN4Q9Y237 131 aaKnown RBP14.45□□□□□ -0.1
ACTN1-207ENST00000553290 MUC3AQ02505 3323 aa14.45□□□□□ -0.1
ACTN1-207ENST00000553290 POTEMA6NI47 508 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 DGAT1O75907 488 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 OR52Z1P0C646 297 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 PHKA2P46019 1235 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 RAB27AP51159 221 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 MXD4Q14582 209 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-207ENST00000553290 ZNF174Q15697 407 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 TTC38Q5R3I4 469 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 FERMT3Q86UX7 667 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 THNSL1Q8IYQ7 743 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 LRRC43Q8N309 656 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 POF1BQ8WVV4 589 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 TUFT1Q9NNX1 390 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 BMP2KQ9NSY1 1161 aaPredicted RBP14.44□□□□□ -0.1
ACTN1-207ENST00000553290 CLDND1Q9NY35 253 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 PLXNA4Q9HCM2 1894 aa14.44□□□□□ -0.1
ACTN1-207ENST00000553290 ZNF623O75123 536 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 FGF18O76093 207 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 ATF7P17544 494 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 DNAJB1P25685 340 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 U2AF2P26368 475 aaKnown RBP eCLIP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 TECP42680 631 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 MCM2P49736 904 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 RARRES1P49788 294 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 HYAL1Q12794 435 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 TFDP1Q14186 410 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 PCBP1Q15365 356 aaKnown RBP eCLIP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 CTC1Q2NKJ3 1217 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 CLLU1OSQ5K130 101 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 EP400NLQ6ZTU2 488 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 RNF149Q8NC42 400 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 NECAB3Q96P71 396 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 POLR3CQ9BUI4 534 aaPredicted RBP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 MRPL9Q9BYD2 267 aaKnown RBP14.43□□□□□ -0.1
ACTN1-207ENST00000553290 XPNPEP1Q9NQW7 623 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 AGPAT5Q9NUQ2 364 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 FAM105AQ9NUU6 356 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 BDP1A6H8Y1 2624 aa14.43□□□□□ -0.1
ACTN1-207ENST00000553290 CSPG5O95196 566 aa14.42□□□□□ -0.1
ACTN1-207ENST00000553290 SPATA31C1P0DKV0 1188 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms