RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 VSIG10LQ86VR7 867 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 ABI1Q8IZP0 508 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 DNAJB3Q8WWF6 145 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 THAP11Q96EK4 314 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 TMEM117Q9H0C3 514 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 PUS7LQ9H0K6 701 aaKnown RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 ELAC1Q9H777 363 aaKnown RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 AGO3Q9H9G7 860 aaKnown RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 MRS2Q9HD23 443 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 RXFP3Q9NSD7 469 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 EPS15L1Q9UBC2 864 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 KIAA1024Q9UPX6 916 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 PCDHB9Q9Y5E1 797 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 IRAK3Q9Y616 596 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 CDY2AQ9Y6F7 541 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 ZFP37Q9Y6Q3 630 aaPredicted RBP5.98□□□□□ -1.45
CKAP4-203ENST00000553039 TANC1Q9C0D5 1861 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 ABCB11O95342 1321 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 TTC3P53804 2025 aa5.98□□□□□ -1.45
CKAP4-203ENST00000553039 UNC79Q9P2D8 2635 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 DMXL1Q9Y485 3027 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 RALGAPA2Q2PPJ7 1873 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 M0R2N6 131 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 GPR182O15218 404 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 PRMT3O60678 531 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 TOP1P11387 765 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 GLULP15104 373 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 ATP5JP18859 108 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 KLRC2P26717 231 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 MAPK1P28482 360 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 RDXP35241 583 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 RPS9P46781 194 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 POLGP54098 1239 aaPredicted RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 FAM189BP81408 668 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 TAGLNQ01995 201 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 SP2Q02086 613 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 SLFN5Q08AF3 891 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 MGAT3Q09327 533 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 ZNF211Q13398 564 aaPredicted RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 SNW1Q13573 536 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 UBXN2BQ14CS0 331 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 USH1GQ495M9 461 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 CCDC184Q52MB2 194 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 SOWAHCQ53LP3 525 aaPredicted RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 UTP14CQ5TAP6 766 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 METTL7BQ6UX53 244 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 VPS52Q8N1B4 723 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 C12orf50Q8NA57 414 aaPredicted RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 GIMAP8Q8ND71 665 aaPredicted RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 SLC22A17Q8WUG5 538 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 LMBR1Q8WVP7 490 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 RSAD2Q8WXG1 361 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 TBC1D5Q92609 795 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 TMEM169Q96HH4 297 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 TTC14Q96N46 770 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 ADAM2Q99965 735 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 LSM14BQ9BX40 385 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 EMILIN2Q9BXX0 1053 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 RHOBTB2Q9BYZ6 727 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 CELF4Q9BZC1 486 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 FOXQ1Q9C009 403 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 BOLA2Q9H3K6 86 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 CWH43Q9H720 699 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 WDR6Q9NNW5 1121 aaKnown RBP5.97□□□□□ -1.45
CKAP4-203ENST00000553039 PXMP2Q9NR77 195 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 RGS18Q9NS28 235 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 EVA1BQ9NVM1 165 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 TMEM161AQ9NX61 479 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 PCDHA1Q9Y5I3 950 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 NAV2Q8IVL1 2488 aa5.97□□□□□ -1.45
CKAP4-203ENST00000553039 DMDP11532 3685 aa5.96□□□□□ -1.45
CKAP4-203ENST00000553039 VPS13AQ96RL7 3174 aa5.96□□□□□ -1.45
CKAP4-203ENST00000553039 GDF9O60383 454 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 SORBS3O60504 671 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 RANBP6O60518 1105 aaKnown RBP5.96□□□□□ -1.46
CKAP4-203ENST00000553039 STAM2O75886 525 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 CCNYL3P0C7X3 344 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 LAMP2P13473 410 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 EPCAMP16422 314 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 CCND2P30279 289 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 WEE1P30291 646 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 GATMP50440 423 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 GPC5P78333 572 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 C19orf57Q0VDD7 668 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 TRAF1Q13077 416 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 PPFIA1Q13136 1202 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 TSGA10IPQ3SY00 556 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 GPATCH4Q5T3I0 446 aaKnown RBP5.96□□□□□ -1.46
CKAP4-203ENST00000553039 KANK3Q6NY19 840 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 CYFIP1Q7L576 1253 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 IFNL3Q8IZI9 196 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 GLIS3Q8NEA6 775 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 CMASQ8NFW8 434 aaPredicted RBP5.96□□□□□ -1.46
CKAP4-203ENST00000553039 ADAM32Q8TC27 787 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 RHPN1Q8TCX5 695 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 LINC01599Q8WXQ3 324 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 CLDN23Q96B33 292 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 IER2Q9BTL4 223 aa5.96□□□□□ -1.46
CKAP4-203ENST00000553039 DDX23Q9BUQ8 820 aaKnown RBP5.96□□□□□ -1.46
CKAP4-203ENST00000553039 RBCK1Q9BYM8 510 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms