RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 TFDP1Q14186 410 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 SF3A1Q15459 793 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 ECM1Q16610 540 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 PADI6Q6TGC4 694 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 KSR1Q8IVT5 923 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 SAMD11Q96NU1 681 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 ELAC1Q9H777 363 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 DDX19AQ9NUU7 478 aaKnown RBP17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 KIAA1024Q9UPX6 916 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 TTC3P53804 2025 aa17.14■□□□□ 0.33
PRPF40B-211ENST00000551063 A0A087WWV3 80 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 PP2D1A8MPX8 630 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 DGKIO75912 1065 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 PHKA2P46019 1235 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 FAM189BP81408 668 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 PCBP1Q15365 356 aaKnown RBP eCLIP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 CCDC85BQ15834 202 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 HYIQ5T013 277 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 IFNLR1Q8IU57 520 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 CMTR2Q8IYT2 770 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 ZNF689Q96CS4 500 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 POLR3FQ9H1D9 316 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 THEGQ9P2T0 379 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 MORC2Q9Y6X9 1032 aaPredicted RBP17.13■□□□□ 0.33
PRPF40B-211ENST00000551063 GBF1Q92538 1859 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 CYP11B2P19099 503 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 FGFR4P22455 802 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 GLRA2P23416 452 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 PTENP60484 403 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 ARNTL2Q8WYA1 636 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 NT5C3AQ9H0P0 336 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 BHMT2Q9H2M3 363 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 TMEM161AQ9NX61 479 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 DNM3Q9UQ16 869 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 RWDD3Q9Y3V2 267 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 PCDHB7Q9Y5E2 793 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 MYO9BQ13459 2157 aa17.12■□□□□ 0.33
PRPF40B-211ENST00000551063 CSDE1O75534 798 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 EYA4O95677 639 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 CDC25AP30304 524 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 LONP1P36776 959 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 MRPS5P82675 430 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 CAPSQ13938 189 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 BTG3Q14201 252 aaPredicted RBP17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 PTPAQ15257 358 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 SPRED2Q7Z698 418 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 CERS4Q9HA82 394 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 GPRC5CQ9NQ84 441 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 PRDM6Q9NQX0 595 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 AGPAT5Q9NUQ2 364 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 PIN4Q9Y237 131 aaKnown RBP17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 CHD9Q3L8U1 2897 aa17.11■□□□□ 0.33
PRPF40B-211ENST00000551063 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 A0A0U1RQF3 1178 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 EPOPA6NHQ4 379 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 HOXA2O43364 376 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 RAB27AP51159 221 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 TMEM119Q4V9L6 283 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 FAM173BQ6P4H8 233 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 CDK5RAP3Q96JB5 506 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 ASB2Q96Q27 587 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 MINDY3Q9H8M7 445 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 CLIC4Q9Y696 253 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 CHD7Q9P2D1 2997 aa17.1■□□□□ 0.33
PRPF40B-211ENST00000551063 E9PMD0 336 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 SKIP12755 728 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 POU3F3P20264 500 aaPredicted RBP17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 UBA7P41226 1012 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 GRB10Q13322 594 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 CABP7Q86V35 215 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 ECHDC2Q86YB7 292 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 RSPH1Q8WYR4 309 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 KIFAP3Q92845 792 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 PNMA5Q96PV4 448 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 USP28Q96RU2 1077 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 C17orf80Q9BSJ5 609 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 MTUS1Q9ULD2 1270 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 EYSQ5T1H1 3165 aa17.09■□□□□ 0.33
PRPF40B-211ENST00000551063 INO80B-WBP1J3KQ70 363 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 ERLIN2O94905 339 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 EOMESO95936 686 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 LINC00271P0C7V0 271 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 AXLP30530 894 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 NAMPTP43490 491 aa17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 NASPP49321 788 aaPredicted RBP17.08■□□□□ 0.32
PRPF40B-211ENST00000551063 MBTD1Q05BQ5 628 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms