RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 A0A0G2JLL6 359 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-214ENST00000550893 KLRG2A4D1S0 409 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-214ENST00000550893 OTOL1A6NHN0 477 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-214ENST00000550893 CHL1O00533 1208 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 PDPK1O15530 556 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 ANXA1P04083 346 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 RFC4P35249 363 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 SLURP1P55000 103 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 CTSWP56202 376 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 TAF7Q15545 349 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-214ENST00000550893 NTRK3Q16288 839 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 NSMFQ6X4W1 530 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 LIPIQ6XZB0 460 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 SP8Q8IXZ3 490 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 LRRC47Q8N1G4 583 aaKnown RBP6.37□□□□□ -1.39
SCAF11-214ENST00000550893 PHF20Q9BVI0 1012 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 GPR27Q9NS67 375 aa6.37□□□□□ -1.39
SCAF11-214ENST00000550893 TRAV20A0A0B4J274 112 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 BLACEA4D250 179 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 SH3D21A4FU49 640 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 CCDC85CA6NKD9 419 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 HGSO14964 777 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 SERPINB2P05120 415 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 CYP2C8P10632 490 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 KCNT2Q6UVM3 1135 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 RSPO2Q6UXX9 243 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 CD300LDQ6UXZ3 194 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 FAM126BQ8IXS8 530 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 ZDHHC14Q8IZN3 488 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 PNISRQ8TF01 805 aaKnown RBP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 ZNF669Q96BR6 464 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 ZBTB8AQ96BR9 441 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 SPATA9Q9BWV2 254 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 SPATA6Q9NWH7 488 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 PPARGC1AQ9UBK2 798 aaKnown RBP6.36□□□□□ -1.39
SCAF11-214ENST00000550893 NUDCQ9Y266 331 aa6.36□□□□□ -1.39
SCAF11-214ENST00000550893 ZNF521Q96K83 1311 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 TADA3O75528 432 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 DGKIO75912 1065 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 NTSR2O95665 410 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 SNRPA1P09661 255 aaKnown RBP6.35□□□□□ -1.39
SCAF11-214ENST00000550893 RIPK4P57078 832 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 TGFB2P61812 414 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 SMAD4Q13485 552 aaKnown RBP6.35□□□□□ -1.39
SCAF11-214ENST00000550893 RASGRF1Q13972 1273 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 STEAP3Q658P3 488 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 OLFM4Q6UX06 510 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 STK32CQ86UX6 486 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 TTC5Q8N0Z6 440 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 DCAF4Q8WV16 495 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 RUNDC1Q96C34 613 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 SPATA25Q9BR10 227 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 JAM3Q9BX67 310 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 CCDC113Q9H0I3 377 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 EPB41L1Q9H4G0 881 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 ZNF652Q9Y2D9 606 aa6.35□□□□□ -1.39
SCAF11-214ENST00000550893 SCN4AP35499 1836 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 MAP3K15Q6ZN16 1313 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 TCRBV5S2A0A599 114 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 STARD3NLO95772 234 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 STAT5AP42229 794 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 KCNC1P48547 511 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 IFRD2Q12894 506 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-214ENST00000550893 GPR162Q16538 588 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 CR1LQ2VPA4 569 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 MTERF2Q49AM1 385 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 CRY2Q49AN0 593 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 EMC4Q5J8M3 183 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 ZNF34Q8IZ26 560 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 SYNE4Q8N205 404 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 ARRDC4Q8NCT1 418 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 C11orf84Q9BUA3 381 aaPredicted RBP6.34□□□□□ -1.39
SCAF11-214ENST00000550893 SIRPGQ9P1W8 387 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 PFDN2Q9UHV9 154 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 PCDHB4Q9Y5E5 795 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 THSD7BQ9C0I4 1608 aa6.34□□□□□ -1.39
SCAF11-214ENST00000550893 APAF1O14727 1248 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 ADCY3O60266 1144 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 SRGNP10124 158 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 SSRP1Q08945 709 aaKnown RBP6.33□□□□□ -1.4
SCAF11-214ENST00000550893 RBL2Q08999 1139 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 LBX2Q6XYB7 198 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 ZC3H18Q86VM9 953 aaKnown RBP6.33□□□□□ -1.4
SCAF11-214ENST00000550893 CARFQ8N187 725 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 TSPYL6Q8N831 410 aa6.33□□□□□ -1.4
SCAF11-214ENST00000550893 MAPK8IP3Q9UPT6 1336 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 ITGA1P56199 1179 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 GPR85P60893 370 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 SERINC3Q13530 473 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 LCE5AQ5TCM9 118 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 STYK1Q6J9G0 422 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 C8orf58Q8NAV2 365 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 PIP4K2CQ8TBX8 421 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 RELTQ969Z4 430 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 ARMC5Q96C12 935 aa6.32□□□□□ -1.4
SCAF11-214ENST00000550893 ZFYVE21Q9BQ24 234 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms