RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 TDP2O95551 362 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 HOXB8P17481 243 aaPredicted RBP23.24■■□□□ 1.31
CACNB3-218ENST00000550771 TECP42680 631 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 ZXDAP98168 799 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 NHLH1Q02575 133 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 ALYREFQ86V81 257 aaKnown RBP23.24■■□□□ 1.31
CACNB3-218ENST00000550771 SLC39A11Q8N1S5 342 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 ETNPPLQ8TBG4 499 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 CYP46A1Q9Y6A2 500 aa23.24■■□□□ 1.31
CACNB3-218ENST00000550771 PIEZO1Q92508 2521 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 TMEM221A6NGB7 291 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 M0R296 226 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 FGFR4P22455 802 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 PBX3P40426 434 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 DNM2P50570 870 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 SYCE2Q6PIF2 218 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 CPLX2Q6PUV4 134 aaKnown RBP23.23■■□□□ 1.31
CACNB3-218ENST00000550771 TMC7Q7Z402 723 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 ZNF410Q86VK4 478 aa23.23■■□□□ 1.31
CACNB3-218ENST00000550771 SFPQP23246 707 aaKnown RBP eCLIP23.22■■□□□ 1.31
CACNB3-218ENST00000550771 SMC1AQ14683 1233 aaKnown RBP23.22■■□□□ 1.31
CACNB3-218ENST00000550771 NPY5RQ15761 445 aa23.22■■□□□ 1.31
CACNB3-218ENST00000550771 MRPL43Q8N983 215 aaKnown RBP23.22■■□□□ 1.31
CACNB3-218ENST00000550771 HELQQ8TDG4 1101 aa23.22■■□□□ 1.31
CACNB3-218ENST00000550771 TM6SF1Q9BZW5 370 aa23.22■■□□□ 1.31
CACNB3-218ENST00000550771 INO80BQ9C086 356 aaPredicted RBP23.22■■□□□ 1.31
CACNB3-218ENST00000550771 WDR81Q562E7 1941 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 ZNF318Q5VUA4 2279 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 CARNS1A5YM72 827 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 CSDE1O75534 798 aaKnown RBP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 SKIP12755 728 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 PHKA2P46019 1235 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 ALDH7A1P49419 539 aaKnown RBP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 BMS1Q14692 1282 aaKnown RBP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 NONOQ15233 471 aaKnown RBP eCLIP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 CASP10Q92851 521 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 PBXIP1Q96AQ6 731 aa23.21■■□□□ 1.31
CACNB3-218ENST00000550771 JPH2Q9BR39 696 aaPredicted RBP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 SUCLA2Q9P2R7 463 aaPredicted RBP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 DDX25Q9UHL0 483 aaKnown RBP23.21■■□□□ 1.31
CACNB3-218ENST00000550771 A0A087WZ62 844 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 TMEM150BA6NC51 233 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 C2orf71A6NGG8 1288 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 MAFO75444 373 aaPredicted RBP23.2■■□□□ 1.3
CACNB3-218ENST00000550771 BCAR1P56945 870 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 PSMC5P62195 406 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 LLGL2Q6P1M3 1020 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 KRT25Q7Z3Z0 450 aa23.2■■□□□ 1.3
CACNB3-218ENST00000550771 FDXACB1Q9BRP7 624 aaPredicted RBP23.2■■□□□ 1.3
CACNB3-218ENST00000550771 DDX11L8A8MPP1 907 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 SIGLEC14Q08ET2 396 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 TPRNQ4KMQ1 711 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 TWF2Q6IBS0 349 aaKnown RBP23.19■■□□□ 1.3
CACNB3-218ENST00000550771 ANO5Q75V66 913 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 RHPN2Q8IUC4 686 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 TMEM169Q96HH4 297 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 SH2D3AQ9BRG2 576 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 HCFC2Q9Y5Z7 792 aa23.19■■□□□ 1.3
CACNB3-218ENST00000550771 MRE11P49959 708 aa23.18■■□□□ 1.3
CACNB3-218ENST00000550771 PPP2R5CQ13362 524 aa23.18■■□□□ 1.3
CACNB3-218ENST00000550771 SUGP1Q8IWZ8 645 aaKnown RBP23.18■■□□□ 1.3
CACNB3-218ENST00000550771 FAM20AQ96MK3 541 aa23.18■■□□□ 1.3
CACNB3-218ENST00000550771 AIFM3Q96NN9 605 aa23.18■■□□□ 1.3
CACNB3-218ENST00000550771 PRRX2Q99811 253 aa23.18■■□□□ 1.3
CACNB3-218ENST00000550771 FAM105AQ9NUU6 356 aa23.18■■□□□ 1.3
CACNB3-218ENST00000550771 PIN4Q9Y237 131 aaKnown RBP23.18■■□□□ 1.3
CACNB3-218ENST00000550771 SLC37A4O43826 429 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 DKC1O60832 514 aaKnown RBP eCLIP23.17■■□□□ 1.3
CACNB3-218ENST00000550771 ZNF623O75123 536 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 RAB27AP51159 221 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 ITIH3Q06033 890 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 PTPN21Q16825 1174 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 INF2Q27J81 1249 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 GLB1LQ6UWU2 654 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 FBXL6Q8N531 539 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 NECTIN4Q96NY8 510 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 LARP6Q9BRS8 491 aaKnown RBP23.17■■□□□ 1.3
CACNB3-218ENST00000550771 APOL5Q9BWW9 433 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 ADAM7Q9H2U9 754 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 KCNMB3Q9NPA1 279 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 CYP26B1Q9NR63 512 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 PPME1Q9Y570 386 aa23.17■■□□□ 1.3
CACNB3-218ENST00000550771 NT5C1B-RDH14C9J2C7 533 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 EML1O00423 815 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 CLASP2O75122 1294 aaKnown RBP23.16■■□□□ 1.3
CACNB3-218ENST00000550771 CDKL5O76039 1030 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 QARSP47897 775 aaKnown RBP23.16■■□□□ 1.3
CACNB3-218ENST00000550771 POLGP54098 1239 aaPredicted RBP23.16■■□□□ 1.3
CACNB3-218ENST00000550771 STK3Q13188 491 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 GIT2Q14161 759 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 LETM2Q2VYF4 491 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 PPP4R3AQ6IN85 833 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 CES5AQ6NT32 575 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 CATSPER4Q7RTX7 472 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 EXOC8Q8IYI6 725 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 NLRP4Q96MN2 994 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 VAV3Q9UKW4 847 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 NR2E1Q9Y466 385 aa23.16■■□□□ 1.3
CACNB3-218ENST00000550771 IRAK3Q9Y616 596 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms