RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 DHX8Q14562 1220 aaKnown RBP15.25■□□□□ 0.03
TROAP-213ENST00000550709 MXD4Q14582 209 aaPredicted RBP15.25■□□□□ 0.03
TROAP-213ENST00000550709 HYIQ5T013 277 aa15.25■□□□□ 0.03
TROAP-213ENST00000550709 CATSPER4Q7RTX7 472 aa15.25■□□□□ 0.03
TROAP-213ENST00000550709 DEFB123Q8N688 67 aa15.25■□□□□ 0.03
TROAP-213ENST00000550709 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
TROAP-213ENST00000550709 RUSC1Q9BVN2 902 aa15.25■□□□□ 0.03
TROAP-213ENST00000550709 TSPYL2Q9H2G4 693 aaPredicted RBP15.25■□□□□ 0.03
TROAP-213ENST00000550709 IFT122Q9HBG6 1241 aa15.25■□□□□ 0.03
TROAP-213ENST00000550709 PCDHA11Q9Y5I1 949 aa15.25■□□□□ 0.03
TROAP-213ENST00000550709 LRRIQ4A6NIV6 560 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 GJB5O95377 273 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 YEATS4O95619 227 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 CA3P07451 260 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 PLA2G4BP0C869 781 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 SFPQP23246 707 aaKnown RBP eCLIP15.24■□□□□ 0.03
TROAP-213ENST00000550709 PHKA2P46019 1235 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 RAD51AP2Q09MP3 1159 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 CAPSQ13938 189 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 TFDP1Q14186 410 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 ZNF697Q5TEC3 545 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 TOP1MTQ969P6 601 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 RAD9AQ99638 391 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 INO80BQ9C086 356 aaPredicted RBP15.24■□□□□ 0.03
TROAP-213ENST00000550709 MINDY3Q9H8M7 445 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 TANC1Q9C0D5 1861 aa15.24■□□□□ 0.03
TROAP-213ENST00000550709 LCHNA4D1U4 455 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 INO80B-WBP1J3KQ70 363 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 ZSCAN20P17040 1043 aaPredicted RBP15.23■□□□□ 0.03
TROAP-213ENST00000550709 TXLNAP40222 546 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 ME1P48163 572 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 PTENP60484 403 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 RINT1Q6NUQ1 792 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 SRGAP1Q7Z6B7 1085 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 LRRC15Q8TF66 581 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 BSNDQ8WZ55 320 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 YME1L1Q96TA2 773 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 CCSER1Q9C0I3 900 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 TTYH1Q9H313 450 aaPredicted RBP15.23■□□□□ 0.03
TROAP-213ENST00000550709 SEMA6BQ9H3T3 888 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 SLC28A3Q9HAS3 691 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 CFAP45Q9UL16 551 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 LRFN2Q9ULH4 789 aa15.23■□□□□ 0.03
TROAP-213ENST00000550709 NPHP3-ACAD11A0A0J9YXS1 232 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 SLC26A4O43511 780 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 HIP1RO75146 1068 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 PPP6R2O75170 966 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 ARHGEF15O94989 841 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 LIG1P18858 919 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 ANP32AP39687 249 aaKnown RBP15.22■□□□□ 0.03
TROAP-213ENST00000550709 SLC12A3P55017 1021 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 MCM6Q14566 821 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 DSC3Q14574 896 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 PPP2R2DQ66LE6 453 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 ATL3Q6DD88 541 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 GPR153Q6NV75 609 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 C1orf186Q6ZWK4 172 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 SLC24A5Q71RS6 500 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
TROAP-213ENST00000550709 RNF169Q8NCN4 708 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 KCNG4Q8TDN1 519 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 ZNF576Q9H609 170 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 CERS4Q9HA82 394 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 RGS18Q9NS28 235 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 CCDC39Q9UFE4 941 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 PIN4Q9Y237 131 aaKnown RBP15.22■□□□□ 0.03
TROAP-213ENST00000550709 PCDHB7Q9Y5E2 793 aa15.22■□□□□ 0.03
TROAP-213ENST00000550709 MORC2Q9Y6X9 1032 aaPredicted RBP15.22■□□□□ 0.03
TROAP-213ENST00000550709 SZT2Q5T011 3432 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 EVPLQ92817 2033 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 C9IYK1 514 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 ERLIN2O94905 339 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 SARSP49591 514 aaKnown RBP15.21■□□□□ 0.03
TROAP-213ENST00000550709 GATMP50440 423 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 TPRNQ4KMQ1 711 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 RRAGBQ5VZM2 374 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 TWF2Q6IBS0 349 aaKnown RBP15.21■□□□□ 0.03
TROAP-213ENST00000550709 GPBP1Q86WP2 473 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 NPAS4Q8IUM7 802 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 DEPTORQ8TB45 409 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 RAD54LQ92698 747 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 KIFAP3Q92845 792 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 IFT74Q96LB3 600 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 KIFC3Q9BVG8 833 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 C1orf112Q9NSG2 853 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 INSL6Q9Y581 213 aa15.21■□□□□ 0.03
TROAP-213ENST00000550709 CCDC169A6NNP5 214 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 CUTAO60888 179 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 STAG3L1P0CL83 205 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 KRT85P78386 507 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 CACNB1Q02641 598 aaPredicted RBP15.2■□□□□ 0.02
TROAP-213ENST00000550709 TAP1Q03518 808 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 LONRF3Q496Y0 759 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 SPRED2Q7Z698 418 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 DAW1Q8N136 415 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 KCTD17Q8N5Z5 321 aa15.2■□□□□ 0.02
TROAP-213ENST00000550709 PDILTQ8N807 584 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms