RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 DEPTORQ8TB45 409 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 PRPF31Q8WWY3 499 aaKnown RBP8.98□□□□□ -0.97
GPN3-207ENST00000550228 NELFBQ8WX92 580 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 NLRP4Q96MN2 994 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 SCLT1Q96NL6 688 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 FIZ1Q96SL8 496 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 GTPBP4Q9BZE4 634 aaKnown RBP8.98□□□□□ -0.97
GPN3-207ENST00000550228 OLFML3Q9NRN5 406 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 GTF2IRD1Q9UHL9 959 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 PCDHA2Q9Y5H9 948 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 GRIN2DO15399 1336 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 SIP14410 1827 aa8.98□□□□□ -0.97
GPN3-207ENST00000550228 SMIM35A0A1B0GVV1 85 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 MBLAC1A4D2B0 266 aaPredicted RBP8.97□□□□□ -0.97
GPN3-207ENST00000550228 TRIM49BA6NDI0 452 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 PSMA7O14818 248 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 HOXC8P31273 242 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 NAMPTP43490 491 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 ZNF165P49910 485 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 NCKAP1LP55160 1127 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 RTP1P59025 263 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 ADAM17P78536 824 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 PAK1Q13153 545 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 TFDP1Q14186 410 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 PTGISQ16647 500 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 STXBP4Q6ZWJ1 553 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 ZNF720Q7Z2F6 126 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 HAUS6Q7Z4H7 955 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 KIAA0319LQ8IZA0 1049 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 MYOCDQ8IZQ8 938 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 GUF1Q8N442 669 aaKnown RBP8.97□□□□□ -0.97
GPN3-207ENST00000550228 RNF149Q8NC42 400 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 DIS3LQ8TF46 1054 aaKnown RBP8.97□□□□□ -0.97
GPN3-207ENST00000550228 SCFD1Q8WVM8 642 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 DNAJB3Q8WWF6 145 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 TMEM106CQ9BVX2 250 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 SENP6Q9GZR1 1112 aaPredicted RBP8.97□□□□□ -0.97
GPN3-207ENST00000550228 NAT10Q9H0A0 1025 aaKnown RBP8.97□□□□□ -0.97
GPN3-207ENST00000550228 CRISPLD2Q9H0B8 497 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 CBX8Q9HC52 389 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 TRMT13Q9NUP7 481 aaKnown RBP8.97□□□□□ -0.97
GPN3-207ENST00000550228 NOD1Q9Y239 953 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 GINS2Q9Y248 185 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 ADGRA3Q8IWK6 1321 aa8.97□□□□□ -0.97
GPN3-207ENST00000550228 A0A087WZ62 844 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 DENND3A2RUS2 1198 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 EIF3DO15371 548 aaKnown RBP eCLIP8.96□□□□□ -0.98
GPN3-207ENST00000550228 KIF20AO95235 890 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 CTSHP09668 335 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 MAPTP10636 758 aaKnown RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 CCNE1P24864 410 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 PPP1R2P41236 205 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 ATN1P54259 1190 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 NLRP11P59045 1033 aaKnown RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 PTPN11Q06124 597 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 KCNA1Q09470 495 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 ALCAMQ13740 583 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 MXD4Q14582 209 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 TPD52L1Q16890 204 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 KIZQ2M2Z5 673 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 EPM2AIP1Q7L775 607 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 LUZP1Q86V48 1076 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 SESTD1Q86VW0 696 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 ZBTB8OSQ8IWT0 167 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 SYCP3Q8IZU3 236 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 SLC17A8Q8NDX2 589 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 TMEM161BQ8NDZ6 487 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 FAM200AQ8TCP9 573 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 NLRP7Q8WX94 980 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 P2RX5Q93086 422 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 DHTKD1Q96HY7 919 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 ACCSQ96QU6 501 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 FDXACB1Q9BRP7 624 aaPredicted RBP8.96□□□□□ -0.98
GPN3-207ENST00000550228 RBSNQ9H1K0 784 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 IKZF4Q9H2S9 585 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 C17orf75Q9HAS0 396 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 PCDHB13Q9Y5F0 798 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 UBE4BO95155 1302 aa8.96□□□□□ -0.98
GPN3-207ENST00000550228 CEP350Q5VT06 3117 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 KIAA0100Q14667 2235 aaKnown RBP8.95□□□□□ -0.98
GPN3-207ENST00000550228 BECN2A8MW95 431 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 H0YCG3 227 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 RBAK-RBAKDNI3L0D1 243 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 INO80B-WBP1J3KQ70 363 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 ARVCFO00192 962 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 ASAP2O43150 1006 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 CSDE1O75534 798 aaKnown RBP8.95□□□□□ -0.98
GPN3-207ENST00000550228 PPP1R37O75864 691 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 PRKCBP05771 671 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 ERCC5P28715 1186 aaPredicted RBP8.95□□□□□ -0.98
GPN3-207ENST00000550228 HOXD13P35453 343 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 PHKA2P46019 1235 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 GJA8P48165 433 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 MNX1P50219 401 aaPredicted RBP8.95□□□□□ -0.98
GPN3-207ENST00000550228 GPC3P51654 580 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 PMS1P54277 932 aaKnown RBP8.95□□□□□ -0.98
GPN3-207ENST00000550228 STRN3Q13033 797 aa8.95□□□□□ -0.98
GPN3-207ENST00000550228 KNOP1Q1ED39 458 aaKnown RBP8.95□□□□□ -0.98
GPN3-207ENST00000550228 BMT2Q1RMZ1 405 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms