RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-223	ENST00000550160	MYC	P01106	439 aa	Predicted RBP	12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	CAPN2	P17655	700 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	BMP6	P22004	513 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	ARL2	P36404	184 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	PRCP	P42785	496 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	NPTX2	P47972	431 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	CDC42EP1	Q00587	391 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	PTPN11	Q06124	597 aa	Predicted RBP	12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	MTFR1	Q15390	333 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	TPD52L1	Q16890	204 aa	Predicted RBP	12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	NBPF20	Q3BBV1	942 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	KLHL10	Q6JEL2	608 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	TAF2	Q6P1X5	1199 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	SESTD1	Q86VW0	696 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	SMYD4	Q8IYR2	804 aa	Predicted RBP	12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	ADSSL1	Q8N142	457 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	ZNF710	Q8N1W2	664 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	LRRC71	Q8N4P6	559 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	KIAA0895	Q8NCT3	520 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	TSG101	Q99816	390 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	HDAC6	Q9UBN7	1215 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	GTF2IRD1	Q9UHL9	959 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	EXOC7	Q9UPT5	735 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	PHF24	Q9UPV7	400 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	AKT3	Q9Y243	479 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160	PCDHA2	Q9Y5H9	948 aa		12.81	□□□□□ -0.36
CNOT2-223	ENST00000550160		A0A0U1RQG5	324 aa	Predicted RBP	12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	MBLAC1	A4D2B0	266 aa	Predicted RBP	12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	GOLGA6L3	A6NEY3	463 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	GJB1	P08034	283 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	CYP2C9	P11712	490 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	CLCN3	P51790	818 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	EFNA5	P52803	228 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	NCKAP1L	P55160	1127 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	SOX10	P56693	466 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	MYL5	Q02045	173 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	ITGA7	Q13683	1181 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	ZNF720	Q7Z2F6	126 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	HAUS6	Q7Z4H7	955 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	RSPH3	Q86UC2	560 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	ZBTB8OS	Q8IWT0	167 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	HS6ST3	Q8IZP7	471 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	NELFB	Q8WX92	580 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	HPS3	Q969F9	1004 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	SCLT1	Q96NL6	688 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	NTPCR	Q9BSD7	190 aa	Known RBP	12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	C2orf40	Q9H1Z8	148 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	ST6GALNAC4	Q9H4F1	302 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	TMEM206	Q9H813	350 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	POLD4	Q9HCU8	107 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	STARD7	Q9NQZ5	370 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	RWDD2A	Q9UIY3	292 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	OGDHL	Q9ULD0	1010 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	CTNND2	Q9UQB3	1225 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	MAPK8IP1	Q9UQF2	711 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	NOD1	Q9Y239	953 aa		12.8	□□□□□ -0.36
CNOT2-223	ENST00000550160	SMIM35	A0A1B0GVV1	85 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	PPP1R3G	B7ZBB8	358 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	IKBKB	O14920	756 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	SLC16A4	O15374	487 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	TFRC	P02786	760 aa	Known RBP	12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	CD44	P16070	742 aa	Known RBP	12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	GLRA2	P23416	452 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	NMT1	P30419	496 aa	Known RBP	12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	HOXC8	P31273	242 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	PHKA2	P46019	1235 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	LRRC63	Q05C16	580 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	LAMTOR4	Q0VGL1	99 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	STRN3	Q13033	797 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	MARCH8	Q5T0T0	291 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	HS2ST1	Q7LGA3	356 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	RHPN2	Q8IUC4	686 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	SYCP3	Q8IZU3	236 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	AOPEP	Q8N6M6	819 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	RNF214	Q8ND24	703 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	ASAP3	Q8TDY4	903 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	U2AF1L4	Q8WU68	220 aa	Known RBP	12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	PRPF31	Q8WWY3	499 aa	Known RBP	12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	BSND	Q8WZ55	320 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	P2RX5	Q93086	422 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	ACCS	Q96QU6	501 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	TMEM106C	Q9BVX2	250 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	CBX8	Q9HC52	389 aa		12.79	□□□□□ -0.36
CNOT2-223	ENST00000550160	SCN10A	Q9Y5Y9	1956 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160		A0A1W2PQ45	241 aa	Predicted RBP	12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160		A0A1W2PQY0	241 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	DENND3	A2RUS2	1198 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160		M0QZ92	97 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	SGPL1	O95470	568 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	FGFR1OP	O95684	399 aa	Known RBP	12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	MYB	P10242	640 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	CCNE1	P24864	410 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	ADAM17	P78536	824 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	GTF2B	Q00403	316 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	POU5F1B	Q06416	359 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	CAPS	Q13938	189 aa		12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	KNOP1	Q1ED39	458 aa	Known RBP	12.78	□□□□□ -0.36
CNOT2-223	ENST00000550160	BMT2	Q1RMZ1	405 aa		12.78	□□□□□ -0.36

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