RNA–Protein interactions for RNA: ENST00000549523.5

USP15-215, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-215ENST00000549523 DIAPH3Q9NSV4 1193 aa13.24□□□□□ -0.29
USP15-215ENST00000549523 SPDYE3A6NKU9 549 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 MEIS1O00470 390 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 SPTLC1O15269 473 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 ZC3H11AO75152 810 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP15-215ENST00000549523 PAPLNO95428 1278 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 GALTP07902 379 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 CNPP09543 421 aaKnown RBP13.23□□□□□ -0.29
USP15-215ENST00000549523 EIF4BP23588 611 aaKnown RBP13.23□□□□□ -0.29
USP15-215ENST00000549523 HDAC1Q13547 482 aaPredicted RBP13.23□□□□□ -0.29
USP15-215ENST00000549523 CEP55Q53EZ4 464 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 PLEKHM2Q8IWE5 1019 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 CMASQ8NFW8 434 aaPredicted RBP13.23□□□□□ -0.29
USP15-215ENST00000549523 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
USP15-215ENST00000549523 FOXQ1Q9C009 403 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 NRDE2Q9H7Z3 1164 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 WDR6Q9NNW5 1121 aaKnown RBP13.23□□□□□ -0.29
USP15-215ENST00000549523 ARHGEF3Q9NR81 526 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 SIT1Q9Y3P8 196 aa13.23□□□□□ -0.29
USP15-215ENST00000549523 hCG_1642624A0A1W2PR95 340 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 FGFR4P22455 802 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
USP15-215ENST00000549523 COL9A3Q14050 684 aaPredicted RBP13.22□□□□□ -0.29
USP15-215ENST00000549523 PPM1JQ5JR12 505 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 PDXDC2PQ6P474 469 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 CATIPQ7Z7H3 387 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 PPFIBP1Q86W92 1011 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 ZNF654Q8IZM8 581 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 PJA1Q8NG27 643 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 SECISBP2LQ93073 1101 aaKnown RBP13.22□□□□□ -0.29
USP15-215ENST00000549523 BORCS6Q96GS4 357 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 PGBD1Q96JS3 809 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 ZNF668Q96K58 619 aaPredicted RBP13.22□□□□□ -0.29
USP15-215ENST00000549523 RHOBTB2Q9BYZ6 727 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 LY9Q9HBG7 655 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 ZNF302Q9NR11 478 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 DNAJB4Q9UDY4 337 aa13.22□□□□□ -0.29
USP15-215ENST00000549523 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
USP15-215ENST00000549523 MAFBQ9Y5Q3 323 aaPredicted RBP13.22□□□□□ -0.29
USP15-215ENST00000549523 CLUHO75153 1309 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 DOCK8Q8NF50 2099 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 ANHXE9PGG2 379 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 DDX39AO00148 427 aaKnown RBP13.21□□□□□ -0.29
USP15-215ENST00000549523 BACH1O14867 736 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 DDAH1O94760 285 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 DARSP14868 501 aaKnown RBP13.21□□□□□ -0.29
USP15-215ENST00000549523 ZSCAN20P17040 1043 aaPredicted RBP13.21□□□□□ -0.29
USP15-215ENST00000549523 SLC11A1P49279 550 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 ZNF528Q3MIS6 628 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 SWSAP1Q6NVH7 229 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 MB21D2Q8IYB1 491 aaPredicted RBP13.21□□□□□ -0.29
USP15-215ENST00000549523 METTL13Q8N6R0 699 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 BBXQ8WY36 941 aaPredicted RBP13.21□□□□□ -0.29
USP15-215ENST00000549523 NELL1Q92832 810 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 LPPQ93052 612 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 ZNF707Q96C28 371 aaPredicted RBP13.21□□□□□ -0.29
USP15-215ENST00000549523 SLC2A4RGQ9NR83 387 aa13.21□□□□□ -0.29
USP15-215ENST00000549523 EVPLQ92817 2033 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 MIA3Q5JRA6 1907 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 E7EWF7 191 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 FAM86B1E9PN63 330 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 FAM86B2P0C5J1 330 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 PHKA2P46019 1235 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 GPC3P51654 580 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 STARD6P59095 220 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 HTR4Q13639 388 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 BMS1Q14692 1282 aaKnown RBP13.2□□□□□ -0.3
USP15-215ENST00000549523 FAM160B1Q5W0V3 765 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 ZNF280BQ86YH2 543 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 LRRC71Q8N4P6 559 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 ST13P5Q8NFI4 369 aaPredicted RBP13.2□□□□□ -0.3
USP15-215ENST00000549523 CTCFLQ8NI51 663 aaPredicted RBP13.2□□□□□ -0.3
USP15-215ENST00000549523 LZTS2Q9BRK4 669 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 DDX23Q9BUQ8 820 aaKnown RBP13.2□□□□□ -0.3
USP15-215ENST00000549523 TRAIPQ9BWF2 469 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 PARD6AQ9NPB6 346 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 MAN1C1Q9NR34 630 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
USP15-215ENST00000549523 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
USP15-215ENST00000549523 PATJQ8NI35 1801 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 IGLV3-22A0A075B6J6 115 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 ERICH2A1L162 156 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 HIP1O00291 1037 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 LILRB5O75023 590 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
USP15-215ENST00000549523 RFPL2O75678 378 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 EFEMP2O95967 443 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 RXRAP19793 462 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 KLRC2P26717 231 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 GBP2P32456 591 aaPredicted RBP13.19□□□□□ -0.3
USP15-215ENST00000549523 KIF5BP33176 963 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 AFF1P51825 1210 aaKnown RBP13.19□□□□□ -0.3
USP15-215ENST00000549523 PTH1RQ03431 593 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 TRDNQ13061 729 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 DCLRE1AQ6PJP8 1040 aa13.19□□□□□ -0.3
USP15-215ENST00000549523 TMEM87AQ8NBN3 555 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms