RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 GCOM2Q9BZD3 368 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 POLR3FQ9H1D9 316 aaPredicted RBP10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 ZHX3Q9H4I2 956 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 SUGCTQ9HAC7 445 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 KIAA1468Q9P260 1216 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 PRKAG2Q9UGJ0 569 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 EXOC7Q9UPT5 735 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 GRIN2DO15399 1336 aa10.79□□□□□ -0.68
SMARCD1-206ENST00000549274 DNAH12Q6ZR08 3092 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 ZBTB39O15060 712 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 EIF3DO15371 548 aaKnown RBP eCLIP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 B4GALT4O60513 344 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 RHOBTB3O94955 611 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 CD4P01730 458 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 CLCN3P51790 818 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 CRYBB1P53674 252 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 MRPS6P82932 125 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 MDM2Q00987 491 aaPredicted RBP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 LAMTOR4Q0VGL1 99 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 STRN3Q13033 797 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 CUL4BQ13620 913 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 FAM26FQ5R3K3 315 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 SASS6Q6UVJ0 657 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 UBE2Q1Q7Z7E8 422 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 SPATA20Q8TB22 786 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 TRAPPC12Q8WVT3 735 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 NLRP7Q8WX94 980 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 PRIMPOLQ96LW4 560 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 NTPCRQ9BSD7 190 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 ST6GALNAC4Q9H4F1 302 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 TMEM134Q9H6X4 195 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 KMT5AQ9NQR1 393 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 XPNPEP1Q9NQW7 623 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 TRPV2Q9Y5S1 764 aa10.78□□□□□ -0.68
SMARCD1-206ENST00000549274 TMEM150BA6NC51 233 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 LRRIQ4A6NIV6 560 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 CCDC85CA6NKD9 419 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 PQBP1O60828 265 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 CLTBP09497 229 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 EN2P19622 333 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 SFPQP23246 707 aaKnown RBP eCLIP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 RFC2P35250 354 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 GPC3P51654 580 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 PEX3P56589 373 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 SNRPFP62306 86 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 COASYQ13057 564 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 MAPK6Q16659 721 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 COBLL1Q53SF7 1204 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 FAM26DQ5JW98 314 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 CAVIN1Q6NZI2 390 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 RBM43Q6ZSC3 357 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 RHPN2Q8IUC4 686 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 KIAA0319LQ8IZA0 1049 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 LRRC71Q8N4P6 559 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 GOLGA5Q8TBA6 731 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 LRRC15Q8TF66 581 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 DNAJB3Q8WWF6 145 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 PRPF31Q8WWY3 499 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 TMEM143Q96AN5 459 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 FAM49AQ9H0Q0 323 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 TMEM206Q9H813 350 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 MRPL44Q9H9J2 332 aaKnown RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 PRMT7Q9NVM4 692 aaPredicted RBP10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 ATP11BQ9Y2G3 1177 aa10.77□□□□□ -0.69
SMARCD1-206ENST00000549274 TANC1Q9C0D5 1861 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 CCDC169A6NNP5 214 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 K7ENM7 598 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 GPR182O15218 404 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 CAVIN2O95810 425 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 PFKMP08237 780 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 SELPP16109 830 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 GLRA2P23416 452 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 AXLP30530 894 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 THPOP40225 353 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 NPTX2P47972 431 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 ATN1P54259 1190 aaPredicted RBP10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 NCKAP1LP55160 1127 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 TLE2Q04725 743 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 MAPK7Q13164 816 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 PNOCQ13519 176 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 TRIM60Q495X7 471 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 KMT5BQ4FZB7 885 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 ZNF658Q5TYW1 1059 aaPredicted RBP10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 CDCA2Q69YH5 1023 aaPredicted RBP10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 MAEAQ7L5Y9 396 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 RNF149Q8NC42 400 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 DIS3LQ8TF46 1054 aaKnown RBP10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 STAMQ92783 540 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 NLRP4Q96MN2 994 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 SH2D3AQ9BRG2 576 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 CELF4Q9BZC1 486 aaKnown RBP10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 BLZF1Q9H2G9 400 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 TRMT13Q9NUP7 481 aaKnown RBP10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 TMEM39AQ9NV64 488 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 ANO10Q9NW15 660 aa10.76□□□□□ -0.69
SMARCD1-206ENST00000549274 PCDHA5Q9Y5H7 936 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms