RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 PIK3R4Q99570 1358 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 A0A1W2PQ45 241 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 A0A1W2PQY0 241 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 TCRBV5S4A2TA0A5A2 114 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 PRAMEF22A3QJZ6 481 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 KRTAP29-1A8MX34 341 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 C22orf46C9J442 243 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 H7BY64 318 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 ZNF561-AS1K7EIQ3 104 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 CHL1O00533 1208 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 KCNK3O14649 394 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 NKRFO15226 690 aaKnown RBP eCLIP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 GPR39O43194 453 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 KATNA1O75449 491 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 FUCA1P04066 466 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 AMY2AP04746 511 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 COL6A2P12110 1019 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 PDE6AP16499 860 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 AMY2BP19961 511 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 PDE6BP35913 854 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 ADCYAP1R1P41586 468 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 KIR2DL1P43626 348 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 KIR2DL2P43627 348 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 GTF2A2P52657 109 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 JAM2P57087 298 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 DUSP4Q13115 394 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 BRDTQ58F21 947 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 HABP4Q5JVS0 413 aaKnown RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 ANKRD45Q5TZF3 282 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 TSHZ3Q63HK5 1081 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 CNKSR3Q6P9H4 555 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 C16orf59Q7L2K0 433 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 HDGFL2Q7Z4V5 671 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 FAM129CQ86XR2 697 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 ANKS4BQ8N8V4 417 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 SMC1BQ8NDV3 1235 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 IL17REQ8NFR9 667 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 OR2W6PQ8NHA6 318 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 COG1Q8WTW3 980 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 CFAP53Q96M91 514 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 C8orf49Q96NF6 230 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 MEIS3Q99687 375 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 PANK2Q9BZ23 570 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 RWDD1Q9H446 243 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 CNTD2Q9H8S5 307 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 XPO5Q9HAV4 1204 aaKnown RBP eCLIP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 SMURF1Q9HCE7 757 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 DLL4Q9NR61 685 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 TYW1Q9NV66 732 aaKnown RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 H2AFY2Q9P0M6 372 aaPredicted RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 B4GALT6Q9UBX8 382 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 YBX2Q9Y2T7 364 aaKnown RBP2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 X6R8D5 127 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 ITSN1Q15811 1721 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 OVOS2A0A0J9YW53 1432 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 PTCH1Q13635 1447 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 OVOS2Q6IE36 1432 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 ATP10DQ9P241 1426 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 IL16Q14005 1332 aa2.93□□□□□ -1.94
DEPDC4-206ENST00000549100 SETD1BQ9UPS6 1966 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 MSH6P52701 1360 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 AATKQ6ZMQ8 1374 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TNRQ92752 1358 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TMEM2Q9UHN6 1383 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 PTPDC1A2A3K4 754 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 FFAR3O14843 346 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 NRDCO43847 1150 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 FKBP9O95302 570 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ANXA1P04083 346 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 NTRK1P04629 796 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 APPP05067 770 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ITGB3P05106 788 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 GNAT1P11488 350 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ATP2A2P16615 1042 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 PRKCAP17252 672 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 KRT15P19012 456 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 SCNN1BP51168 640 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 CORO7P57737 925 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 ST5P78524 1137 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TMPRSS15P98073 1019 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 EXOSC10Q01780 885 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 MTMR1Q13613 665 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 PKP1Q13835 747 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 TWISTNBQ3B726 338 aaPredicted RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 FAM47CQ5HY64 1035 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 WWC2Q6AWC2 1192 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 FKBP9P1Q75LS8 142 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 OTOP1Q7RTM1 612 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 OTOP3Q7RTS5 596 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 OSTM1Q86WC4 334 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 CHD1LQ86WJ1 897 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 KIF18BQ86Y91 864 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 UNC5CLQ8IV45 518 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 RAVER1Q8IY67 606 aaKnown RBP2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 LZTR1Q8N653 840 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 PDZD8Q8NEN9 1154 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 NUP43Q8NFH3 380 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 NLGN2Q8NFZ4 835 aa2.92□□□□□ -1.94
DEPDC4-206ENST00000549100 PIP4K2CQ8TBX8 421 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms