RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 SCAPERQ9BY12 1400 aa6.59□□□□□ -1.36
UBE2N-202ENST00000548946 FOXS1O43638 330 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 MPIG6BO95866 241 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 CR2P20023 1033 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 EIF4HQ15056 248 aaKnown RBP6.58□□□□□ -1.36
UBE2N-202ENST00000548946 NFE2L2Q16236 605 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 RNF151Q2KHN1 245 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 IGSF22Q8N9C0 903 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 CALML6Q8TD86 181 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 ASB15Q8WXK1 588 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 AMNQ9BXJ7 453 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 OSBPL2Q9H1P3 480 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 OR10A5Q9H207 317 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 IQGAP3Q86VI3 1631 aa6.58□□□□□ -1.36
UBE2N-202ENST00000548946 SYNMO15061 1565 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 SAMD9LQ8IVG5 1584 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 A0A0G2JNJ9 132 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 APAF1O14727 1248 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 SDHAP31040 664 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 MEOX1P50221 254 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 CD83Q01151 205 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 TMEM132BQ14DG7 1078 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 PRKD1Q15139 912 aaPredicted RBP6.57□□□□□ -1.36
UBE2N-202ENST00000548946 TMEM177Q53S58 311 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 DLG3Q92796 817 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 DNAJC2Q99543 621 aaKnown RBP6.57□□□□□ -1.36
UBE2N-202ENST00000548946 NCOA5Q9HCD5 579 aaKnown RBP6.57□□□□□ -1.36
UBE2N-202ENST00000548946 Q9UFV3 132 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 CDC42EP3Q9UKI2 254 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 OAZ3Q9UMX2 235 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 B3GALT1Q9Y5Z6 326 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 PLXNC1O60486 1568 aa6.57□□□□□ -1.36
UBE2N-202ENST00000548946 IQGAP1P46940 1657 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 PRAMEF22A3QJZ6 481 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 B4E1Z4 1266 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 PLD2O14939 933 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 ARHGAP6O43182 974 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 CDC14BO60729 498 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 KCNA6P17658 529 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 COMTP21964 271 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 IRF9Q00978 393 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 NFYCQ13952 458 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 R3HDM1Q15032 1099 aaKnown RBP6.56□□□□□ -1.36
UBE2N-202ENST00000548946 ARHGAP44Q17R89 818 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 GRAMD4Q6IC98 578 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 LRSAM1Q6UWE0 723 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 USP30Q70CQ3 517 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 FGD2Q7Z6J4 655 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 DDX53Q86TM3 631 aaKnown RBP6.56□□□□□ -1.36
UBE2N-202ENST00000548946 CCDC146Q8IYE0 955 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 RTKN2Q8IZC4 609 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 LILRB2Q8N423 598 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 C12orf65Q9H3J6 166 aaKnown RBP6.56□□□□□ -1.36
UBE2N-202ENST00000548946 MSL2Q9HCI7 577 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 TRIM39Q9HCM9 518 aa6.56□□□□□ -1.36
UBE2N-202ENST00000548946 PUF60Q9UHX1 559 aaKnown RBP6.56□□□□□ -1.36
UBE2N-202ENST00000548946 CENPJQ9HC77 1338 aaPredicted RBP6.55□□□□□ -1.36
UBE2N-202ENST00000548946 SCAF11Q99590 1463 aaKnown RBP6.55□□□□□ -1.36
UBE2N-202ENST00000548946 MADDQ8WXG6 1647 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 FSHBP01225 129 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 C6P13671 934 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 MAP3K12Q12852 859 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 MOGSQ13724 837 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 NOLC1Q14978 699 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBE2N-202ENST00000548946 PCOLCEQ15113 449 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 AGBL4Q5VU57 503 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 TMEM200BQ69YZ2 307 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 TRIM68Q6AZZ1 485 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 ABHD17CQ6PCB6 329 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 LARP4Q71RC2 724 aaKnown RBP eCLIP6.55□□□□□ -1.36
UBE2N-202ENST00000548946 SREK1Q8WXA9 508 aaKnown RBP6.55□□□□□ -1.36
UBE2N-202ENST00000548946 ADOQ96SZ5 270 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 DPYSL5Q9BPU6 564 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 BOCQ9BWV1 1114 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 OR10A2Q9H208 303 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 SLKQ9H2G2 1235 aaPredicted RBP6.55□□□□□ -1.36
UBE2N-202ENST00000548946 SRRDQ9UH36 339 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 RTEL1-TNFRSF6BF6WH68 1400 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 MYO5CQ9NQX4 1742 aa6.55□□□□□ -1.36
UBE2N-202ENST00000548946 PREX2Q70Z35 1606 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 GOLGA6L3A6NEY3 463 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 GOLGA6L22H0YM25 854 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 AKAP8O43823 692 aaKnown RBP6.54□□□□□ -1.36
UBE2N-202ENST00000548946 RAD17O75943 681 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 TACR2P21452 398 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 APEX1P27695 318 aaKnown RBP6.54□□□□□ -1.36
UBE2N-202ENST00000548946 RPS19P39019 145 aaKnown RBP6.54□□□□□ -1.36
UBE2N-202ENST00000548946 MRE11P49959 708 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 RARSP54136 660 aaKnown RBP6.54□□□□□ -1.36
UBE2N-202ENST00000548946 FNDC3BQ53EP0 1204 aaKnown RBP6.54□□□□□ -1.36
UBE2N-202ENST00000548946 TM4SF20Q53R12 229 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 SPDYAQ5MJ70 313 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 POLNQ7Z5Q5 900 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 FUKQ8N0W3 1084 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 EDAQ92838 391 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 E2F7Q96AV8 911 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 KIAA1683Q9H0B3 1180 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 VPS11Q9H270 941 aa6.54□□□□□ -1.36
UBE2N-202ENST00000548946 CHMP5Q9NZZ3 219 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms