RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 CRIPAKQ8N1N5 446 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 RNF149Q8NC42 400 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 ASAP3Q8TDY4 903 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 SNX29Q8TEQ0 813 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 TCP11Q8WWU5 503 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
DDX54-205ENST00000548786 GPRC5CQ9NQ84 441 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 HCSTQ9UBK5 93 aa17.57■□□□□ 0.4
DDX54-205ENST00000548786 PIN4Q9Y237 131 aaKnown RBP17.57■□□□□ 0.4
DDX54-205ENST00000548786 MRPL42Q9Y6G3 142 aaKnown RBP17.57■□□□□ 0.4
DDX54-205ENST00000548786 PRRC2BQ5JSZ5 2229 aaKnown RBP17.57■□□□□ 0.4
DDX54-205ENST00000548786 DGAT1O75907 488 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 RPA1P27694 616 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 CDC42EP1Q00587 391 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 HAUS3Q68CZ6 603 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 DTHD1Q6ZMT9 781 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.56■□□□□ 0.4
DDX54-205ENST00000548786 NACC1Q96RE7 527 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 POLR3FQ9H1D9 316 aaPredicted RBP17.56■□□□□ 0.4
DDX54-205ENST00000548786 MINDY3Q9H8M7 445 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 IFT122Q9HBG6 1241 aa17.56■□□□□ 0.4
DDX54-205ENST00000548786 ARHGEF35A5YM69 484 aa17.55■□□□□ 0.4
DDX54-205ENST00000548786 VWA3AA6NCI4 1184 aa17.55■□□□□ 0.4
DDX54-205ENST00000548786 GPM6BQ13491 265 aa17.55■□□□□ 0.4
DDX54-205ENST00000548786 SPOUT1Q5T280 376 aaKnown RBP17.55■□□□□ 0.4
DDX54-205ENST00000548786 TWF2Q6IBS0 349 aaKnown RBP17.55■□□□□ 0.4
DDX54-205ENST00000548786 RAB34Q9BZG1 259 aa17.55■□□□□ 0.4
DDX54-205ENST00000548786 POLD4Q9HCU8 107 aa17.55■□□□□ 0.4
DDX54-205ENST00000548786 DDX19AQ9NUU7 478 aaKnown RBP17.55■□□□□ 0.4
DDX54-205ENST00000548786 KIAA1024Q9UPX6 916 aa17.55■□□□□ 0.4
DDX54-205ENST00000548786 KIAA1671Q9BY89 1806 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 LAD1O00515 517 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 GAS2O43903 313 aaKnown RBP17.54■□□□□ 0.4
DDX54-205ENST00000548786 LINC00271P0C7V0 271 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 PDCP20941 246 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 SYT1P21579 422 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 ATP2C1P98194 919 aaPredicted RBP17.54■□□□□ 0.4
DDX54-205ENST00000548786 CAPSQ13938 189 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 ECHDC2Q86YB7 292 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 HSCBQ8IWL3 235 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 CMTR2Q8IYT2 770 aaKnown RBP17.54■□□□□ 0.4
DDX54-205ENST00000548786 IGSF22Q8N9C0 903 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 SPRYD3Q8NCJ5 442 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 PLIN2Q99541 437 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 INO80BQ9C086 356 aaPredicted RBP17.54■□□□□ 0.4
DDX54-205ENST00000548786 TMEM161AQ9NX61 479 aa17.54■□□□□ 0.4
DDX54-205ENST00000548786 RALGAPA2Q2PPJ7 1873 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 GLRA2P23416 452 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 BMPR1AP36894 532 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 PRPHP41219 470 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 PHKA2P46019 1235 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 PDIA5Q14554 519 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 KRT79Q5XKE5 535 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 FAM173BQ6P4H8 233 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 PADI6Q6TGC4 694 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 BRAPQ7Z569 592 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 LPPQ93052 612 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 SAMD11Q96NU1 681 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 BHMT2Q9H2M3 363 aa17.53■□□□□ 0.4
DDX54-205ENST00000548786 DBR1Q9UK59 544 aaKnown RBP17.53■□□□□ 0.4
DDX54-205ENST00000548786 FNDC1Q4ZHG4 1894 aaPredicted RBP17.52■□□□□ 0.4
DDX54-205ENST00000548786 LRRIQ4A6NIV6 560 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 E9PMD0 336 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 INO80B-WBP1J3KQ70 363 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 XRCC6P12956 609 aaKnown RBP eCLIP17.52■□□□□ 0.4
DDX54-205ENST00000548786 ARL2P36404 184 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 FAM189BP81408 668 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 TFDP1Q14186 410 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 MXD4Q14582 209 aaPredicted RBP17.52■□□□□ 0.4
DDX54-205ENST00000548786 SRGAP1Q7Z6B7 1085 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 ABI1Q8IZP0 508 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 HELQQ8TDG4 1101 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 CLP1Q92989 425 aaKnown RBP17.52■□□□□ 0.4
DDX54-205ENST00000548786 INTS4Q96HW7 963 aaKnown RBP17.52■□□□□ 0.4
DDX54-205ENST00000548786 CPB2Q96IY4 423 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 MMTAG2Q9BU76 263 aaKnown RBP17.52■□□□□ 0.4
DDX54-205ENST00000548786 ALG13Q9NP73 1137 aaKnown RBP17.52■□□□□ 0.4
DDX54-205ENST00000548786 RNF19AQ9NV58 838 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 DACT1Q9NYF0 836 aa17.52■□□□□ 0.4
DDX54-205ENST00000548786 H3BNC9 293 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 GRM6O15303 877 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 ASAP2O43150 1006 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 ERLIN2O94905 339 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 HSP90AA1P07900 732 aaKnown RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 ATF7P17544 494 aaPredicted RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 CEBPZQ03701 1054 aaKnown RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 RESTQ13127 1097 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 SF3A1Q15459 793 aaKnown RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 FOXD4L5Q5VV16 416 aaPredicted RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 FOXD4L4Q8WXT5 416 aaPredicted RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 SNX21Q969T3 373 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 ELAC1Q9H777 363 aaKnown RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 CHST12Q9NRB3 414 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 AGPAT5Q9NUQ2 364 aa17.51■□□□□ 0.39
DDX54-205ENST00000548786 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
DDX54-205ENST00000548786 A0A0U1RQF3 1178 aa17.5■□□□□ 0.39
DDX54-205ENST00000548786 MEIS3P2A8K0S8 358 aa17.5■□□□□ 0.39
DDX54-205ENST00000548786 SSBP05455 408 aaKnown RBP eCLIP17.5■□□□□ 0.39
DDX54-205ENST00000548786 LIG1P18858 919 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms