RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 IQCDQ96DY2 449 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 MKNK1Q9BUB5 465 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 AP5M1Q9H0R1 490 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 FLRT1Q9NZU1 646 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 ZSWIM8A7E2V4 1837 aa13.59□□□□□ -0.23
RAB5B-204ENST00000548068 MAGEB2O15479 319 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 ECM2O94769 699 aaPredicted RBP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 GNRH1P01148 92 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 IGHA2P01877 340 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 AKR1A1P14550 325 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 SFPQP23246 707 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 MSNP26038 577 aaKnown RBP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 CYP2C19P33261 490 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 ARL2P36404 184 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 PBX1P40424 430 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 CPT1AP50416 773 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 MXD4Q14582 209 aaPredicted RBP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 ARHGEF6Q15052 776 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 CCL14Q16627 93 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 GJC2Q5T442 439 aaPredicted RBP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 TLK2Q86UE8 772 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 SLC9A9Q8IVB4 645 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 MAP4K3Q8IVH8 894 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 C12orf56Q8IXR9 622 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 DEPTORQ8TB45 409 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 AGPAT3Q9NRZ7 376 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 ARMCX3Q9UH62 379 aaPredicted RBP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 TBX20Q9UMR3 447 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 GNEQ9Y223 722 aaKnown RBP13.58□□□□□ -0.24
RAB5B-204ENST00000548068 FRMD4BQ9Y2L6 1034 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 ZKSCAN5Q9Y2L8 839 aa13.58□□□□□ -0.24
RAB5B-204ENST00000548068 IGKV6-21A0A0C4DH24 114 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 DENND3A2RUS2 1198 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 A6NJR5 290 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 H3BRB1 525 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 TEX33O43247 280 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 TGFB1I1O43294 461 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 PSMC2P35998 433 aaKnown RBP13.57□□□□□ -0.24
RAB5B-204ENST00000548068 EFNA5P52803 228 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 STRN3Q13033 797 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 TFDP1Q14186 410 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 VWA3BQ502W6 1294 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 TMEM63BQ5T3F8 832 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 CCDC112Q8NEF3 446 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 PSPC1Q8WXF1 523 aaKnown RBP13.57□□□□□ -0.24
RAB5B-204ENST00000548068 BSNDQ8WZ55 320 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 TMEM143Q96AN5 459 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 NDST4Q9H3R1 872 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 TUT1Q9H6E5 874 aaKnown RBP13.57□□□□□ -0.24
RAB5B-204ENST00000548068 ARHGAP28Q9P2N2 729 aa13.57□□□□□ -0.24
RAB5B-204ENST00000548068 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAB5B-204ENST00000548068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
RAB5B-204ENST00000548068 LRRIQ4A6NIV6 560 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 ZBTB42B2RXF5 422 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 ASAP2O43150 1006 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 DYNC1LI2O43237 492 aaPredicted RBP13.56□□□□□ -0.24
RAB5B-204ENST00000548068 TBC1D8O95759 1140 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 ZNF286BP0CG31 522 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 CTGFP29279 349 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 FLT3LGP49771 235 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 KCNA1Q09470 495 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 TBX2Q13207 712 aaPredicted RBP13.56□□□□□ -0.24
RAB5B-204ENST00000548068 MIIPQ5JXC2 388 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 PRAMEF19Q5SWL8 479 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 CEP135Q66GS9 1140 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 TRIM59Q8IWR1 403 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 ZBTB8OSQ8IWT0 167 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 FAM186BQ8IYM0 893 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 EEF2KMTQ96G04 330 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 C16orf70Q9BSU1 422 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 NUP58Q9BVL2 599 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 ARHGAP39Q9C0H5 1083 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 DMAC2Q9NW81 257 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 RNF186Q9NXI6 227 aa13.56□□□□□ -0.24
RAB5B-204ENST00000548068 RRN3P2A6NIE6 340 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 ESPNB1AK53 854 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 KIAA0391O15091 583 aaKnown RBP13.55□□□□□ -0.24
RAB5B-204ENST00000548068 CLIC2O15247 247 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 MAPK13O15264 365 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 KPNA6O60684 536 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 DUSP11O75319 330 aaKnown RBP13.55□□□□□ -0.24
RAB5B-204ENST00000548068 TRPA1O75762 1119 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 CYBAP13498 195 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 INSRRP14616 1297 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 GLRA2P23416 452 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 TMOD1P28289 359 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 VEGFBP49765 207 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 SOX10P56693 466 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 PRKCZQ05513 592 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 ARMCX5Q6P1M9 558 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 CNGA4Q8IV77 575 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 KSR1Q8IVT5 923 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 LRRC8AQ8IWT6 810 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 ASAP3Q8TDY4 903 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 CCDC51Q96ER9 411 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 BICD1Q96G01 975 aa13.55□□□□□ -0.24
RAB5B-204ENST00000548068 ERO1AQ96HE7 468 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms