RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 DYDC2Q96IM9 177 aa24.01■■□□□ 1.43
USP44-204ENST00000547951 NLRP4Q96MN2 994 aa24.01■■□□□ 1.43
USP44-204ENST00000547951 LXNQ9BS40 222 aa24.01■■□□□ 1.43
USP44-204ENST00000547951 C11orf16Q9NQ32 467 aa24.01■■□□□ 1.43
USP44-204ENST00000547951 RNF216Q9NWF9 866 aaPredicted RBP24.01■■□□□ 1.43
USP44-204ENST00000547951 A0A0U1RQF3 1178 aa24■■□□□ 1.43
USP44-204ENST00000547951 FAM86C2PA6NEL3 165 aa24■■□□□ 1.43
USP44-204ENST00000547951 PER2O15055 1255 aa24■■□□□ 1.43
USP44-204ENST00000547951 TBX3O15119 743 aa24■■□□□ 1.43
USP44-204ENST00000547951 P4HBP07237 508 aaKnown RBP24■■□□□ 1.43
USP44-204ENST00000547951 CYP4A11Q02928 519 aa24■■□□□ 1.43
USP44-204ENST00000547951 CTTNQ14247 550 aaKnown RBP24■■□□□ 1.43
USP44-204ENST00000547951 HELQQ8TDG4 1101 aa24■■□□□ 1.43
USP44-204ENST00000547951 TMEM143Q96AN5 459 aa24■■□□□ 1.43
USP44-204ENST00000547951 AAASQ9NRG9 546 aa24■■□□□ 1.43
USP44-204ENST00000547951 CLEC1BQ9P126 229 aa24■■□□□ 1.43
USP44-204ENST00000547951 MBTPS2O43462 519 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 MARCH6O60337 910 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 DNM2P50570 870 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 ZP2Q05996 745 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 EPHA7Q15375 998 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 DIS3L2Q8IYB7 885 aaKnown RBP23.99■■□□□ 1.43
USP44-204ENST00000547951 EFHBQ8N7U6 833 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 VN1R2Q8NFZ6 395 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 LPPQ93052 612 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 MSLNLQ96KJ4 702 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 CEP170P1Q96L14 293 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 C1QTNF1Q9BXJ1 281 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 TLR9Q9NR96 1032 aa23.99■■□□□ 1.43
USP44-204ENST00000547951 MEIS3P2A8K0S8 358 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 LAG3P18627 525 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 NDUFV1P49821 464 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 GUCY1B3Q02153 619 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 ZNF410Q86VK4 478 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 LRRC43Q8N309 656 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 MICAL1Q8TDZ2 1067 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 DHX33Q9H6R0 707 aaKnown RBP23.98■■□□□ 1.43
USP44-204ENST00000547951 IFT122Q9HBG6 1241 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 CD207Q9UJ71 328 aa23.98■■□□□ 1.43
USP44-204ENST00000547951 BARX2Q9UMQ3 279 aaPredicted RBP23.98■■□□□ 1.43
USP44-204ENST00000547951 PIN4Q9Y237 131 aaKnown RBP23.98■■□□□ 1.43
USP44-204ENST00000547951 PI4K2BG5E9Z4 385 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 FSCN2O14926 492 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 HOXA2O43364 376 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 TRIOO75962 3097 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 YWHABP31946 246 aaKnown RBP23.97■■□□□ 1.43
USP44-204ENST00000547951 PHKA2P46019 1235 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 UBE3AQ05086 875 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 KCNT2Q6UVM3 1135 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 C4orf19Q8IY42 314 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 ABI1Q8IZP0 508 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 PRPF31Q8WWY3 499 aaKnown RBP23.97■■□□□ 1.43
USP44-204ENST00000547951 NAP1L4Q99733 375 aaKnown RBP23.97■■□□□ 1.43
USP44-204ENST00000547951 LRFN3Q9BTN0 628 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 TLE6Q9H808 572 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 MINDY3Q9H8M7 445 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 BRMS1Q9HCU9 246 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 COL4A3BPQ9Y5P4 624 aa23.97■■□□□ 1.43
USP44-204ENST00000547951 SFPQP23246 707 aaKnown RBP eCLIP23.96■■□□□ 1.43
USP44-204ENST00000547951 POLGP54098 1239 aaPredicted RBP23.96■■□□□ 1.43
USP44-204ENST00000547951 SMAD4Q13485 552 aaKnown RBP23.96■■□□□ 1.43
USP44-204ENST00000547951 SMAD2Q15796 467 aaKnown RBP23.96■■□□□ 1.43
USP44-204ENST00000547951 PLPP4Q5VZY2 271 aa23.96■■□□□ 1.43
USP44-204ENST00000547951 TWF2Q6IBS0 349 aaKnown RBP23.96■■□□□ 1.43
USP44-204ENST00000547951 SLFN12Q8IYM2 578 aa23.96■■□□□ 1.43
USP44-204ENST00000547951 DACT1Q9NYF0 836 aa23.96■■□□□ 1.43
USP44-204ENST00000547951 A0A087WWV3 80 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 C19orf67A6NJJ6 358 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 HIDE1A8MVS5 230 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 SLITRK3O94933 977 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 EOMESO95936 686 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 SRGAP2CP0DJJ0 459 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 CDC42EP1Q00587 391 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 LAMTOR4Q0VGL1 99 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 EMC2Q15006 297 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 CALCRLQ16602 461 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 XKR9Q5GH70 373 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 CATSPER4Q7RTX7 472 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 TPH2Q8IWU9 490 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 ADHFE1Q8IWW8 467 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 SLC7A3Q8WY07 619 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 MRPS27Q92552 414 aaKnown RBP23.95■■□□□ 1.42
USP44-204ENST00000547951 PPP2R3CQ969Q6 453 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 ZNF558Q96NG5 402 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 EIF2AK1Q9BQI3 630 aaKnown RBP23.95■■□□□ 1.42
USP44-204ENST00000547951 CHST12Q9NRB3 414 aa23.95■■□□□ 1.42
USP44-204ENST00000547951 NT5C1B-RDH14C9J2C7 533 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 BAG4O95429 457 aaKnown RBP23.94■■□□□ 1.42
USP44-204ENST00000547951 PLCB3Q01970 1234 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 CSPP1Q1MSJ5 1256 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 CCDC83Q8IWF9 413 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 TCF25Q9BQ70 676 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 JPH2Q9BR39 696 aaPredicted RBP23.94■■□□□ 1.42
USP44-204ENST00000547951 TMEM60Q9H2L4 133 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 ZSWIM4Q9H7M6 989 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 XPNPEP1Q9NQW7 623 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 FAM50BQ9Y247 325 aa23.94■■□□□ 1.42
USP44-204ENST00000547951 DKC1O60832 514 aaKnown RBP eCLIP23.93■■□□□ 1.42
USP44-204ENST00000547951 RFC5P40937 340 aa23.93■■□□□ 1.42
USP44-204ENST00000547951 DUSP6Q16828 381 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms