RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 SCFD1Q8WVM8 642 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 NACC1Q96RE7 527 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 AGPAT5Q9NUQ2 364 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 FAM184BQ9ULE4 1060 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 COLQQ9Y215 455 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 A0A0U1RQJ8 604 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 ZBED6P86452 979 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 FIGNQ5HY92 759 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 NELFCDQ8IXH7 590 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 ATRIPQ8WXE1 791 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 IQCDQ96DY2 449 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 CDHR1Q96JP9 859 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 RUSC1Q9BVN2 902 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 EPN1Q9Y6I3 576 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-204ENST00000547687 A0A1W2PQJ5 194 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 SPATA31C2B4DYI2 1134 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 KRT76Q01546 638 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 RINT1Q6NUQ1 792 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 WDR59Q6PJI9 974 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 ZNF397Q8NF99 534 aaPredicted RBP18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 CEP63Q96MT8 703 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 REEP2Q9BRK0 252 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 ZNHIT6Q9NWK9 470 aaKnown RBP18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 COL4A3BPQ9Y5P4 624 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 WDR81Q562E7 1941 aa18.17■□□□□ 0.5
CHMP1A-204ENST00000547687 ASB14A6NK59 587 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 KIF5CO60282 957 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 EDNRBP24530 442 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 IRX2Q9BZI1 471 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 ZMYND15Q9H091 742 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 KCTD10Q9H3F6 313 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 ZSWIM4Q9H7M6 989 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 V9GYY5 206 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 WDR64B1ANS9 1081 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 ADAMTS4O75173 837 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 NDUFA10O95299 355 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 SFNP31947 248 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 JAK3P52333 1124 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 SP2Q02086 613 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 MEA1Q16626 185 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 ARHGAP29Q52LW3 1261 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 SEPT14Q6ZU15 432 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 POLD4Q9HCU8 107 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 TCEAL9Q9UHQ7 104 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 SIK3Q9Y2K2 1263 aa18.16■□□□□ 0.5
CHMP1A-204ENST00000547687 LOXHD1Q8IVV2 1947 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 SORBS3O60504 671 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 GNA14O95837 355 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 C6orf222P0C671 652 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 QARSP47897 775 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 UGCGQ16739 394 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 CCDC40Q4G0X9 1142 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 ZNF746Q6NUN9 644 aaPredicted RBP18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 SFR1Q86XK3 245 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 PDCL2Q8N4E4 241 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 TELO2Q9Y4R8 837 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 ICAM3P32942 547 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 BEX3Q00994 111 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 C1orf186Q6ZWK4 172 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 RNF180Q86T96 592 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 ATP11BQ9Y2G3 1177 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 NFASCO94856 1347 aa18.15■□□□□ 0.5
CHMP1A-204ENST00000547687 RSPH10B2B2RC85 870 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 RSPH10BP0C881 870 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 SMPD1P17405 629 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 SP4Q02446 784 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 TNFAIP2Q03169 654 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 KCNA10Q16322 511 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 TAPT1Q6NXT6 567 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 LRRN4CLQ8ND94 238 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 MMRN2Q9H8L6 949 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 JPH1Q9HDC5 661 aaPredicted RBP18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 SLC9A2Q9UBY0 812 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 PCDHA10Q9Y5I2 948 aa18.14■□□□□ 0.49
CHMP1A-204ENST00000547687 DUSP11O75319 330 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 TBCAO75347 108 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 ARHGAP25P42331 645 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 CASP5P51878 434 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 RTP1P59025 263 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 ADAM9Q13443 819 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 EDRF1Q3B7T1 1238 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 ZNF569Q5MCW4 686 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 SLC39A5Q6ZMH5 540 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 REXO2Q9Y3B8 237 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 A0A1W2PQ45 241 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 A0A1W2PQY0 241 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 LYPLA2O95372 231 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 PSMC5P62195 406 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 TRIM60Q495X7 471 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 EPM2AIP1Q7L775 607 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 TRMT1LQ7Z2T5 733 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 ZC3H3Q8IXZ2 948 aaKnown RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 RDM1Q8NG50 284 aa18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 FAM207AQ9NSI2 230 aaPredicted RBP18.13■□□□□ 0.49
CHMP1A-204ENST00000547687 CGNQ9P2M7 1197 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms