RNA–Protein interactions for RNA: ENST00000547208.5

BEST3-208, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 1,187 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-208ENST00000547208 MTMR9Q96QG7 549 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 FDXACB1Q9BRP7 624 aaPredicted RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 LLPHQ9BRT6 129 aaKnown RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 DHX33Q9H6R0 707 aaKnown RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 CWH43Q9H720 699 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 IFT122Q9HBG6 1241 aa11.55□□□□□ -0.56
BEST3-208ENST00000547208 SUCLA2Q9P2R7 463 aaPredicted RBP11.55□□□□□ -0.56
BEST3-208ENST00000547208 A0A0U1RQF3 1178 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 SLITRK3O94933 977 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 YWHABP31946 246 aaKnown RBP11.54□□□□□ -0.56
BEST3-208ENST00000547208 IRS1P35568 1242 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 CDC42EP1Q00587 391 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 GUCY1B3Q02153 619 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 TRIM29Q14134 588 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
BEST3-208ENST00000547208 CALCRLQ16602 461 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 CLLU1OSQ5K130 101 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 POTEHQ6S545 545 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 ZNF410Q86VK4 478 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 RHPN2Q8IUC4 686 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 HSD17B14Q9BPX1 270 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 TRAIPQ9BWF2 469 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 GCOM2Q9BZD3 368 aaPredicted RBP11.54□□□□□ -0.56
BEST3-208ENST00000547208 TMEM60Q9H2L4 133 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 ATP6V0A4Q9HBG4 840 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 TYW1Q9NV66 732 aaKnown RBP11.54□□□□□ -0.56
BEST3-208ENST00000547208 PPME1Q9Y570 386 aa11.54□□□□□ -0.56
BEST3-208ENST00000547208 H3BQ06 376 aaPredicted RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 NEMFO60524 1076 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 DKC1O60832 514 aaKnown RBP eCLIP11.53□□□□□ -0.56
BEST3-208ENST00000547208 LYPLA2O95372 231 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 BAG4O95429 457 aaKnown RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 ZSCAN20P17040 1043 aaPredicted RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 GTF2F1P35269 517 aaKnown RBP eCLIP11.53□□□□□ -0.56
BEST3-208ENST00000547208 DNM2P50570 870 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 DLX2Q07687 328 aaPredicted RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 ADGRD2Q7Z7M1 963 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 COLGALT1Q8NBJ5 622 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 POF1BQ8WVV4 589 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 TMEM143Q96AN5 459 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 CEP170P1Q96L14 293 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 NLRP4Q96MN2 994 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 SCLT1Q96NL6 688 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 EIF2AK1Q9BQI3 630 aaKnown RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 JPH2Q9BR39 696 aaPredicted RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 TMEM117Q9H0C3 514 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 ZSWIM4Q9H7M6 989 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 TTC12Q9H892 705 aaPredicted RBP11.53□□□□□ -0.56
BEST3-208ENST00000547208 XPNPEP1Q9NQW7 623 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 CHST12Q9NRB3 414 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 PCDHA12Q9UN75 941 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 PCDHGC5Q9Y5F6 944 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 WDFY4Q6ZS81 3184 aa11.53□□□□□ -0.56
BEST3-208ENST00000547208 GRXCR2A6NFK2 248 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 LINC01565O15544 149 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 MARCH6O60337 910 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 TBX10O75333 385 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 FGF18O76093 207 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 CSPG5O95196 566 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 EOMESO95936 686 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 IL9P15248 144 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 SFPQP23246 707 aaKnown RBP eCLIP11.52□□□□□ -0.57
BEST3-208ENST00000547208 RFC5P40937 340 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 TXKP42681 527 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 PHKA2P46019 1235 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 POLGP54098 1239 aaPredicted RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 EMC2Q15006 297 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 PTCRAQ6ISU1 281 aaPredicted RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 TPH2Q8IWU9 490 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 FBXO18Q8NFZ0 1043 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 PRPF31Q8WWY3 499 aaKnown RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 SLC7A3Q8WY07 619 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 C8orf76Q96K31 380 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 ZSCAN31Q96LW9 406 aaPredicted RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 FOXP1Q9H334 677 aaPredicted RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 MINDY3Q9H8M7 445 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 SH2B1Q9NRF2 756 aaPredicted RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 BMP2KQ9NSY1 1161 aaPredicted RBP11.52□□□□□ -0.57
BEST3-208ENST00000547208 CLDND1Q9NY35 253 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 DACT1Q9NYF0 836 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 COL4A3BPQ9Y5P4 624 aa11.52□□□□□ -0.57
BEST3-208ENST00000547208 PIEZO1Q92508 2521 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 POTEMA6NI47 508 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 MEIS3P2A8K0S8 358 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 FSCN2O14926 492 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 HOXA2O43364 376 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 NCK2O43639 380 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 GAS2O43903 313 aaKnown RBP11.51□□□□□ -0.57
BEST3-208ENST00000547208 SPATA31C1P0DKV0 1188 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 LAG3P18627 525 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 MCM7P33993 719 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 UBE3AQ05086 875 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 LAMTOR4Q0VGL1 99 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 XKR9Q5GH70 373 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 OTUD6AQ7L8S5 288 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 FERMT3Q86UX7 667 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 FAM178BQ8IXR5 827 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 EXOC8Q8IYI6 725 aa11.51□□□□□ -0.57
BEST3-208ENST00000547208 LRRC43Q8N309 656 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms