RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 MRPS27Q92552 414 aaKnown RBP20.97■□□□□ 0.95
CHERP-204ENST00000546538 HAS1Q92839 578 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 PPP2R3CQ969Q6 453 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 FDXACB1Q9BRP7 624 aaPredicted RBP20.97■□□□□ 0.95
CHERP-204ENST00000546538 RNF216Q9NWF9 866 aaPredicted RBP20.97■□□□□ 0.95
CHERP-204ENST00000546538 LZTS1Q9Y250 596 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 HCN4Q9Y3Q4 1203 aa20.97■□□□□ 0.95
CHERP-204ENST00000546538 MEIS3P2A8K0S8 358 aa20.96■□□□□ 0.95
CHERP-204ENST00000546538 NPEPPSP55786 919 aa20.96■□□□□ 0.95
CHERP-204ENST00000546538 PPP2R5CQ13362 524 aa20.96■□□□□ 0.95
CHERP-204ENST00000546538 PLPP4Q5VZY2 271 aa20.96■□□□□ 0.95
CHERP-204ENST00000546538 DDX11L8A8MPP1 907 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 LOC730098B7Z3J9 87 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 LARGE1O95461 756 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 FDPSP14324 419 aaKnown RBP20.95■□□□□ 0.95
CHERP-204ENST00000546538 CSPP1Q1MSJ5 1256 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 HERC4Q5GLZ8 1057 aaPredicted RBP20.95■□□□□ 0.95
CHERP-204ENST00000546538 TMEM173Q86WV6 379 aaPredicted RBP20.95■□□□□ 0.95
CHERP-204ENST00000546538 SUSD6Q92537 303 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 SCLT1Q96NL6 688 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 TCF25Q9BQ70 676 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 SUCLA2Q9P2R7 463 aaPredicted RBP20.95■□□□□ 0.95
CHERP-204ENST00000546538 PIEZO1Q92508 2521 aa20.95■□□□□ 0.95
CHERP-204ENST00000546538 HOXA2O43364 376 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 PSMC5P62195 406 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 SPIRE1Q08AE8 756 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 PPP4R3AQ6IN85 833 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 CPLX2Q6PUV4 134 aaKnown RBP20.95■□□□□ 0.94
CHERP-204ENST00000546538 TMEM184AQ6ZMB5 413 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 SLC39A11Q8N1S5 342 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 TNFRSF25Q93038 417 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 LPPQ93052 612 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 ZNF558Q96NG5 402 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 POP1Q99575 1024 aaKnown RBP20.95■□□□□ 0.94
CHERP-204ENST00000546538 GCOM2Q9BZD3 368 aaPredicted RBP20.95■□□□□ 0.94
CHERP-204ENST00000546538 S1PR5Q9H228 398 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 IFT122Q9HBG6 1241 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 CYP26B1Q9NR63 512 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 CDH22Q9UJ99 828 aa20.95■□□□□ 0.94
CHERP-204ENST00000546538 B4GALT3O60512 393 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 EOMESO95936 686 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 PHKA2P46019 1235 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 AK2P54819 239 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 CBX2Q14781 532 aaPredicted RBP20.94■□□□□ 0.94
CHERP-204ENST00000546538 LONRF3Q496Y0 759 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 SYCE2Q6PIF2 218 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 PIK3AP1Q6ZUJ8 805 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 HFE2Q6ZVN8 426 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 NEK8Q86SG6 692 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 POTEDQ86YR6 584 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 RHPN2Q8IUC4 686 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 TRAIPQ9BWF2 469 aa20.94■□□□□ 0.94
CHERP-204ENST00000546538 SLKQ9H2G2 1235 aaPredicted RBP20.94■□□□□ 0.94
CHERP-204ENST00000546538 NT5C1B-RDH14C9J2C7 533 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 WNT7AO00755 349 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 ZBTB39O15060 712 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 HOXD11P31277 338 aaPredicted RBP20.93■□□□□ 0.94
CHERP-204ENST00000546538 QARSP47897 775 aaKnown RBP20.93■□□□□ 0.94
CHERP-204ENST00000546538 NR5A1Q13285 461 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 PDE12Q6L8Q7 609 aaKnown RBP20.93■□□□□ 0.94
CHERP-204ENST00000546538 ZNF410Q86VK4 478 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 ABI1Q8IZP0 508 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 NECAB1Q8N987 351 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 BCL7CQ8WUZ0 217 aaPredicted RBP20.93■□□□□ 0.94
CHERP-204ENST00000546538 FAM20AQ96MK3 541 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 CDCA3Q99618 268 aaPredicted RBP20.93■□□□□ 0.94
CHERP-204ENST00000546538 MINDY3Q9H8M7 445 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 CHST12Q9NRB3 414 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 RGL1Q9NZL6 768 aa20.93■□□□□ 0.94
CHERP-204ENST00000546538 ARID2Q68CP9 1835 aa20.92■□□□□ 0.94
CHERP-204ENST00000546538 CCDC194A0A1B0GVG4 234 aa20.92■□□□□ 0.94
CHERP-204ENST00000546538 NLRP4Q96MN2 994 aa20.92■□□□□ 0.94
CHERP-204ENST00000546538 DHX33Q9H6R0 707 aaKnown RBP20.92■□□□□ 0.94
CHERP-204ENST00000546538 ENTPD7Q9NQZ7 604 aa20.92■□□□□ 0.94
CHERP-204ENST00000546538 DACT1Q9NYF0 836 aa20.92■□□□□ 0.94
CHERP-204ENST00000546538 SPG21Q9NZD8 308 aa20.92■□□□□ 0.94
CHERP-204ENST00000546538 CCNT1O60563 726 aaKnown RBP20.91■□□□□ 0.94
CHERP-204ENST00000546538 CDKL5O76039 1030 aa20.91■□□□□ 0.94
CHERP-204ENST00000546538 BCAR1P56945 870 aa20.91■□□□□ 0.94
CHERP-204ENST00000546538 ME3Q16798 604 aa20.91■□□□□ 0.94
CHERP-204ENST00000546538 ANKRD54Q6NXT1 300 aa20.91■□□□□ 0.94
CHERP-204ENST00000546538 LLGL2Q6P1M3 1020 aa20.91■□□□□ 0.94
CHERP-204ENST00000546538 BMP2KQ9NSY1 1161 aaPredicted RBP20.91■□□□□ 0.94
CHERP-204ENST00000546538 ORC3Q9UBD5 711 aaPredicted RBP20.91■□□□□ 0.94
CHERP-204ENST00000546538 PIN4Q9Y237 131 aaKnown RBP20.91■□□□□ 0.94
CHERP-204ENST00000546538 C2orf71A6NGG8 1288 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 GCFC2P16383 781 aaKnown RBP20.9■□□□□ 0.94
CHERP-204ENST00000546538 SFPQP23246 707 aaKnown RBP eCLIP20.9■□□□□ 0.94
CHERP-204ENST00000546538 PPM1AP35813 382 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 AFF1P51825 1210 aaKnown RBP20.9■□□□□ 0.94
CHERP-204ENST00000546538 CDC42EP1Q00587 391 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 ST3GAL1Q11201 340 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 FEZF2Q8TBJ5 459 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 TMEM143Q96AN5 459 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 LXNQ9BS40 222 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 APOL5Q9BWW9 433 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 PHF7Q9BWX1 381 aaPredicted RBP20.9■□□□□ 0.94
CHERP-204ENST00000546538 VN1R3Q9BXE9 311 aa20.9■□□□□ 0.94
CHERP-204ENST00000546538 NGRNQ9NPE2 291 aaKnown RBP20.9■□□□□ 0.94
CHERP-204ENST00000546538 FAM105AQ9NUU6 356 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms