RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 MEFVO15553 781 aaPredicted RBP17.14■□□□□ 0.33
LDLR-204ENST00000545707 GAS7O60861 476 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 KIAA0754O94854 1291 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 TNFAIP3P21580 790 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 PPATQ06203 517 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 IFT88Q13099 833 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 ALG3Q92685 438 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 SYT11Q9BT88 431 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 INTUQ9ULD6 942 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 FRMD4BQ9Y2L6 1034 aa17.14■□□□□ 0.33
LDLR-204ENST00000545707 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
LDLR-204ENST00000545707 EIF3DO15371 548 aaKnown RBP eCLIP17.13■□□□□ 0.33
LDLR-204ENST00000545707 ECE2O60344 883 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 EXOC3O60645 756 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 CLSTN1O94985 981 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 TMEM253P0C7T8 217 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 LMNB1P20700 586 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 TBC1D10BQ4KMP7 808 aaPredicted RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 HS2ST1Q7LGA3 356 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 SYCP3Q8IZU3 236 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 ATP8B4Q8TF62 1192 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 MAGOHBQ96A72 148 aaKnown RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 CSRNP1Q96S65 589 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 TMX4Q9H1E5 349 aaPredicted RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 UNC45AQ9H3U1 944 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 SLITRK6Q9H5Y7 841 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 APEX2Q9UBZ4 518 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 SLC12A6Q9UHW9 1150 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 TMEM110-MUSTN1A8MSY1 372 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 NPEPPSP55786 919 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 KRT71Q3SY84 523 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 MEX3CQ5U5Q3 659 aaKnown RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 ICE2Q659A1 982 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 ZNF746Q6NUN9 644 aaPredicted RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 EIF1ADQ8N9N8 165 aaKnown RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 ZSWIM2Q8NEG5 633 aa17.13■□□□□ 0.33
LDLR-204ENST00000545707 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.13■□□□□ 0.33
LDLR-204ENST00000545707 PRMT6Q96LA8 375 aaPredicted RBP17.13■□□□□ 0.33
LDLR-204ENST00000545707 ANXA13P27216 316 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 ALDH1B1P30837 517 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 MARCKSL1P49006 195 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 MYL7Q01449 175 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 SF3B2Q13435 895 aaKnown RBP17.12■□□□□ 0.33
LDLR-204ENST00000545707 QPCTQ16769 361 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 MCTP2Q6DN12 878 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 C1orf131Q8NDD1 294 aaKnown RBP17.12■□□□□ 0.33
LDLR-204ENST00000545707 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 DMAC2Q9NW81 257 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 FAM107AO95990 144 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 PRELPP51888 382 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 STAT2P52630 851 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 KCNV1Q6PIU1 500 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 BTNL9Q6UXG8 535 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 MDM1Q8TC05 714 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 GOPCQ9HD26 462 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 UBE2TQ9NPD8 197 aaPredicted RBP17.12■□□□□ 0.33
LDLR-204ENST00000545707 ACP6Q9NPH0 428 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 STK24Q9Y6E0 443 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 QSER1Q2KHR3 1735 aa17.12■□□□□ 0.33
LDLR-204ENST00000545707 SHBGP04278 402 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 HNRNPH1P31943 449 aaKnown RBP17.11■□□□□ 0.33
LDLR-204ENST00000545707 SF3A3Q12874 501 aaKnown RBP eCLIP17.11■□□□□ 0.339e-7■■□□□ 13.7
LDLR-204ENST00000545707 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 UBAP2Q5T6F2 1119 aaKnown RBP17.11■□□□□ 0.33
LDLR-204ENST00000545707 STRIP1Q5VSL9 837 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 ARHGEF19Q8IW93 802 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 DAW1Q8N136 415 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 PLCD3Q8N3E9 789 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 KRT35Q92764 455 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 KAT5Q92993 513 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 CYFIP2Q96F07 1278 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 SNX24Q9Y343 169 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 NCANO14594 1321 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 PIK3CDO00329 1044 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 HIP1RO75146 1068 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 GUCY2CP25092 1073 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 USP8P40818 1118 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 FNTAP49354 379 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 PLTPP55058 493 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 DR1Q01658 176 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 IFFO1Q0D2I5 559 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 BFSP1Q12934 665 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 PPP2R5CQ13362 524 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 LLGL1Q15334 1064 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 CPNE8Q86YQ8 564 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 LXNQ9BS40 222 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 ALG6Q9Y672 507 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
LDLR-204ENST00000545707 TCP10L2B9ZVM9 353 aa17.1■□□□□ 0.33
LDLR-204ENST00000545707 H0YHG0 523 aa17.1■□□□□ 0.33
LDLR-204ENST00000545707 MMP10P09238 476 aa17.1■□□□□ 0.33
LDLR-204ENST00000545707 PPP2R2AP63151 447 aa17.1■□□□□ 0.33
LDLR-204ENST00000545707 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
LDLR-204ENST00000545707 RUFY4Q6ZNE9 571 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms