RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 STAT3P40763 770 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 SPIRE1Q08AE8 756 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 COASYQ13057 564 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 HLTFQ14527 1009 aaKnown RBP eCLIP20.45■□□□□ 0.86
MSLN-202ENST00000545450 SLFN12Q8IYM2 578 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 ACTRT1Q8TDG2 376 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 CLEC4DQ8WXI8 215 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 WNK4Q96J92 1243 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 PBKQ96KB5 322 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 KLC4Q9NSK0 619 aa20.45■□□□□ 0.86
MSLN-202ENST00000545450 IGLV3-22A0A075B6J6 115 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 KCNK3O14649 394 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 CHUKO15111 745 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 TBX3O15119 743 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 UBXN2AP68543 259 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 ZNF844Q08AG5 666 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 BIRC3Q13489 604 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 RAPGEF1Q13905 1077 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 C10orf76Q5T2E6 689 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 CALR3Q96L12 384 aaKnown RBP20.44■□□□□ 0.86
MSLN-202ENST00000545450 PPANQ9NQ55 473 aaKnown RBP20.44■□□□□ 0.86
MSLN-202ENST00000545450 MSH4O15457 936 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 TRAPPC3O43617 180 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 KIF4AO95239 1232 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 HSD17B4P51659 736 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 ASIC2Q16515 512 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 RUFY4Q6ZNE9 571 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 FAM133AQ8N9E0 248 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 DCPSQ96C86 337 aaKnown RBP20.44■□□□□ 0.86
MSLN-202ENST00000545450 C12orf42Q96LP6 360 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 GANQ9H2C0 597 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 CXorf56Q9H5V9 222 aa20.44■□□□□ 0.86
MSLN-202ENST00000545450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.44■□□□□ 0.86
MSLN-202ENST00000545450 ALAS1P13196 640 aa20.43■□□□□ 0.86
MSLN-202ENST00000545450 ZNF76P36508 570 aa20.43■□□□□ 0.86
MSLN-202ENST00000545450 FAM26FQ5R3K3 315 aa20.43■□□□□ 0.86
MSLN-202ENST00000545450 ATG4CQ96DT6 458 aa20.43■□□□□ 0.86
MSLN-202ENST00000545450 JPH2Q9BR39 696 aaPredicted RBP20.43■□□□□ 0.86
MSLN-202ENST00000545450 ACTR5Q9H9F9 607 aaPredicted RBP20.43■□□□□ 0.86
MSLN-202ENST00000545450 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
MSLN-202ENST00000545450 DDX20Q9UHI6 824 aaKnown RBP20.43■□□□□ 0.86
MSLN-202ENST00000545450 ZBTB48P10074 688 aaPredicted RBP20.42■□□□□ 0.86
MSLN-202ENST00000545450 ARID5AQ03989 594 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 HYIQ5T013 277 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 SULF1Q8IWU6 871 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 LRRC57Q8N9N7 239 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 OR2W6PQ8NHA6 318 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 HOMER2Q9NSB8 354 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 PANK4Q9NVE7 773 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 CTNNA1P35221 906 aaKnown RBP20.42■□□□□ 0.86
MSLN-202ENST00000545450 AGBL2Q5U5Z8 902 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 TACO1Q9BSH4 297 aaKnown RBP20.42■□□□□ 0.86
MSLN-202ENST00000545450 CENPHQ9H3R5 247 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 AFG3L2Q9Y4W6 797 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 SNCAIPQ9Y6H5 919 aa20.42■□□□□ 0.86
MSLN-202ENST00000545450 C19orf81C9J6K1 198 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 VWA5AO00534 786 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 SART1O43290 800 aaKnown RBP20.41■□□□□ 0.86
MSLN-202ENST00000545450 PAEPP09466 180 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 VGLL4Q14135 290 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 CCDC121Q6ZUS5 278 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 ZC3H3Q8IXZ2 948 aaKnown RBP20.41■□□□□ 0.86
MSLN-202ENST00000545450 FAM20AQ96MK3 541 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 CD248Q9HCU0 757 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 SLC40A1Q9NP59 571 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 PCDHA2Q9Y5H9 948 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 POTEB3A0JP26 581 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 C5orf60A6NFR6 353 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 POTECB2RU33 542 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 CEP104O60308 925 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 IFI16Q16666 785 aaKnown RBP20.41■□□□□ 0.86
MSLN-202ENST00000545450 POTEBQ6S5H4 581 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 ILDR2Q71H61 639 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 IRF2BP2Q7Z5L9 587 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 DDX42Q86XP3 938 aaKnown RBP eCLIP20.41■□□□□ 0.86
MSLN-202ENST00000545450 L3MBTL3Q96JM7 780 aaPredicted RBP20.41■□□□□ 0.86
MSLN-202ENST00000545450 FGFBP2Q9BYJ0 223 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 NEUROG2Q9H2A3 272 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 VAV3Q9UKW4 847 aa20.41■□□□□ 0.86
MSLN-202ENST00000545450 KDM3AQ9Y4C1 1321 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 ZBED4O75132 1171 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 MED24O75448 989 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 GHRHRQ02643 423 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 PTK2Q05397 1052 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 MTMR3Q13615 1198 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 EHMT1Q9H9B1 1298 aa20.4■□□□□ 0.86
MSLN-202ENST00000545450 PGRMC1O00264 195 aaKnown RBP20.39■□□□□ 0.86
MSLN-202ENST00000545450 CCDC172P0C7W6 258 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 PPP2R2AP63151 447 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 ENOX2Q16206 610 aaKnown RBP20.39■□□□□ 0.86
MSLN-202ENST00000545450 DPY19L2Q6NUT2 758 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 DPY19L2P1Q6NXN4 242 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.39■□□□□ 0.86
MSLN-202ENST00000545450 OSBPL7Q9BZF2 842 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 KCTD10Q9H3F6 313 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 FBXL5Q9UKA1 691 aa20.39■□□□□ 0.86
MSLN-202ENST00000545450 CCDC188H7C350 402 aa20.39■□□□□ 0.85
MSLN-202ENST00000545450 QPCTQ16769 361 aa20.39■□□□□ 0.85
MSLN-202ENST00000545450 SLC30A10Q6XR72 485 aa20.39■□□□□ 0.85
MSLN-202ENST00000545450 ZNF571Q7Z3V5 609 aaPredicted RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms