RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 NKX3-2P78367 333 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 TFDP1Q14186 410 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 MXD4Q14582 209 aaPredicted RBP15.16■□□□□ 0.02
SCARB1-209ENST00000545305 EDRF1Q3B7T1 1238 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 ZC2HC1CQ53FD0 456 aaPredicted RBP15.16■□□□□ 0.02
SCARB1-209ENST00000545305 HSP90AA4PQ58FG1 418 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 CDKAL1Q5VV42 579 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 LRRC71Q8N4P6 559 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 METTL13Q8N6R0 699 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 GOLGA5Q8TBA6 731 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 ASAP3Q8TDY4 903 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 MTG1Q9BT17 334 aaPredicted RBP15.16■□□□□ 0.02
SCARB1-209ENST00000545305 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
SCARB1-209ENST00000545305 HSD3B7Q9H2F3 369 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 KCTD10Q9H3F6 313 aa15.16■□□□□ 0.02
SCARB1-209ENST00000545305 HMX1Q9NP08 348 aaPredicted RBP15.16■□□□□ 0.02
SCARB1-209ENST00000545305 DENND3A2RUS2 1198 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 KCNJ18B7U540 433 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 ADCY5O95622 1261 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 TPM2P07951 284 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 GLRA2P23416 452 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 RPL13P26373 211 aaKnown RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 EEF1GP26641 437 aaKnown RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 KLRC1P26715 233 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 IRX5P78411 483 aaPredicted RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 GTF2BQ00403 316 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 PURAQ00577 322 aaKnown RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 FANCCQ00597 558 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 FKBP3Q00688 224 aaKnown RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 CCDC173Q0VFZ6 552 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 KCNJ12Q14500 433 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 ZCWPW2Q504Y3 356 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 TMEM161BQ8NDZ6 487 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 KAT2BQ92831 832 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 CEP63Q96MT8 703 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 CTAGE1Q96RT6 745 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 MAP7D2Q96T17 732 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 NTPCRQ9BSD7 190 aaKnown RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 STRA6Q9BX79 667 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 GBP3Q9H0R5 595 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
SCARB1-209ENST00000545305 TRAF3IP3Q9Y228 551 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 PHLPP2Q6ZVD8 1323 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 NRCAMQ92823 1304 aa15.15■□□□□ 0.02
SCARB1-209ENST00000545305 ZMYM2Q9UBW7 1377 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 HAS3O00219 553 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 ASAP2O43150 1006 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 ADAMTS4O75173 837 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 MYCNP04198 464 aaPredicted RBP15.14■□□□□ 0.01
SCARB1-209ENST00000545305 CST5P28325 142 aaPredicted RBP15.14■□□□□ 0.01
SCARB1-209ENST00000545305 CLCN3P51790 818 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 ZNF75DP51815 510 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 STRN3Q13033 797 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 CAPSQ13938 189 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 MTHFD1LQ6UB35 978 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 RNF180Q86T96 592 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 CREBRFQ8IUR6 639 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 ZBTB8OSQ8IWT0 167 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 PCSK9Q8NBP7 692 aaKnown RBP15.14■□□□□ 0.01
SCARB1-209ENST00000545305 PRPF31Q8WWY3 499 aaKnown RBP15.14■□□□□ 0.01
SCARB1-209ENST00000545305 KIFC3Q9BVG8 833 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 C2orf40Q9H1Z8 148 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 IFNKQ9P0W0 207 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 CGNQ9P2M7 1197 aaKnown RBP15.14■□□□□ 0.01
SCARB1-209ENST00000545305 ARHGAP28Q9P2N2 729 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 PTPN22Q9Y2R2 807 aa15.14■□□□□ 0.01
SCARB1-209ENST00000545305 CETN3O15182 167 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 AP5Z1O43299 807 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 GNA14O95837 355 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 GNAT1P11488 350 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 NR2F2P24468 414 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 HOXD13P35453 343 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 EFNA5P52803 228 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 UBASH3AP57075 661 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 SNRPFP62306 86 aaKnown RBP15.13■□□□□ 0.01
SCARB1-209ENST00000545305 LAMTOR4Q0VGL1 99 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 FILIP1LQ4L180 1135 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 TCP11X2Q5H9J9 407 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 NFRKBQ6P4R8 1299 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 LRRC55Q6ZSA7 311 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 RHPN2Q8IUC4 686 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 MAP4K3Q8IVH8 894 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 KSR1Q8IVT5 923 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 LMBR1Q8WVP7 490 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 KAT6AQ92794 2004 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 BICD1Q96G01 975 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 CNOT6LQ96LI5 555 aaKnown RBP15.13■□□□□ 0.01
SCARB1-209ENST00000545305 SETD4Q9NVD3 440 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 TBX20Q9UMR3 447 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 AKT3Q9Y243 479 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 ADGRA3Q8IWK6 1321 aa15.13■□□□□ 0.01
SCARB1-209ENST00000545305 C17orf102A2RUQ5 167 aa15.12■□□□□ 0.01
SCARB1-209ENST00000545305 NR3C1P04150 777 aa15.12■□□□□ 0.01
SCARB1-209ENST00000545305 MTIF2P46199 727 aaKnown RBP15.12■□□□□ 0.01
SCARB1-209ENST00000545305 KCNA1Q09470 495 aa15.12■□□□□ 0.01
SCARB1-209ENST00000545305 MKRN4PQ13434 485 aaPredicted RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms