RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 DEPDC7Q96QD5 511 aa9.17□□□□□ -0.94
ATXN3-216ENST00000545170 DSCC1Q9BVC3 393 aa9.17□□□□□ -0.94
ATXN3-216ENST00000545170 RANBP17Q9H2T7 1088 aaKnown RBP9.17□□□□□ -0.94
ATXN3-216ENST00000545170 CYLDQ9NQC7 956 aa9.17□□□□□ -0.94
ATXN3-216ENST00000545170 C20orf96Q9NUD7 363 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-216ENST00000545170 RABGEF1Q9UJ41 708 aa9.17□□□□□ -0.94
ATXN3-216ENST00000545170 PRG3Q9Y2Y8 225 aaPredicted RBP9.17□□□□□ -0.94
ATXN3-216ENST00000545170 SMCO2A6NFE2 343 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 NR2F2P24468 414 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 KRT24Q2M2I5 525 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 FAM26FQ5R3K3 315 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 POTEEQ6S8J3 1075 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 PRPF39Q86UA1 669 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 SNF8Q96H20 258 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 GLT8D2Q9H1C3 349 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 POLR3EQ9NVU0 708 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 HACD3Q9P035 362 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 COL4A3BPQ9Y5P4 624 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CCDC61Q9Y6R9 512 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 IGF1RP08069 1367 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 SCAF11Q99590 1463 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 PPIDQ08752 370 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 AKIRIN2Q53H80 203 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CROCCP3Q8IVE0 287 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 DHX40Q8IX18 779 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 GJA10Q969M2 543 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CCDC127Q96BQ5 260 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 DDX47Q9H0S4 455 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 NOC2LQ9Y3T9 749 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CCDC78A2IDD5 438 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 TMEM247A6NEH6 219 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 TJP3O95049 919 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 LIG4P49917 911 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 BYSLQ13895 437 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 LRRC41Q15345 812 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 TRIP4Q15650 581 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 BNIPLQ7Z465 357 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 ZNF804AQ7Z570 1209 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 NUP93Q8N1F7 819 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 REXO1Q8N1G1 1221 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 SEPT1Q8WYJ6 367 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 HSPH1Q92598 858 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 UBE2TQ9NPD8 197 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 FAM135BQ49AJ0 1406 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 GOLGA8TH3BQL2 631 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 USP1O94782 785 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 PSMC2P35998 433 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 RFC5P40937 340 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 FCHO2Q0JRZ9 810 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CCDC60Q8IWA6 550 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CCNYL1Q8N7R7 359 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 PARD3BQ8TEW8 1205 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 EPAS1Q99814 870 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 FAM129AQ9BZQ8 928 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 KLHL4Q9C0H6 718 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 BTBD18B2RXH4 712 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 STX7O15400 261 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 ITIH4Q14624 930 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 ARMC3Q5W041 872 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 OR2W6PQ8NHA6 318 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 APOL6Q9BWW8 343 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 MAGEF1Q9HAY2 307 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 MRPL47Q9HD33 250 aaKnown RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 DISC1Q9NRI5 854 aa9.16□□□□□ -0.94
ATXN3-216ENST00000545170 TTC7AQ9ULT0 858 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-216ENST00000545170 CDC25CP30307 473 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 IFNA8P32881 189 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 BPIFB4P59827 614 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 MAPRE1Q15691 268 aaKnown RBP9.15□□□□□ -0.94
ATXN3-216ENST00000545170 SGSM1Q2NKQ1 1148 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 KLHL17Q6TDP4 642 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 RSRC2Q7L4I2 434 aaKnown RBP9.15□□□□□ -0.94
ATXN3-216ENST00000545170 VPS50Q96JG6 964 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 SPRTNQ9H040 489 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-216ENST00000545170 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
ATXN3-216ENST00000545170 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 TRABDQ9H4I3 376 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 RUBCNLQ9H714 662 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 JAG2Q9Y219 1238 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 C2CD2Q9Y426 696 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 SYNDIG1LA6NDD5 238 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 ZNF263O14978 683 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 GAS7O60861 476 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 CNGA2Q16280 664 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 IMPG1Q17R60 797 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 LONRF1Q17RB8 773 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 PPM1NQ8N819 430 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 NT5C1BQ96P26 610 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 ZIM3Q96PE6 472 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 LZTS2Q9BRK4 669 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 BRIP1Q9BX63 1249 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 ZWILCHQ9H900 591 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 PRDM11Q9NQV5 511 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 ZBED1O96006 694 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 CPA2P48052 419 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 KLHL12Q53G59 568 aa9.15□□□□□ -0.94
ATXN3-216ENST00000545170 SZRD1Q7Z422 152 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms