RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 FAM102BQ5T8I3 360 aa18.89■□□□□ 0.61
HOXD8-204ENST00000544999 ECHDC2Q86YB7 292 aa18.89■□□□□ 0.61
HOXD8-204ENST00000544999 KSR1Q8IVT5 923 aa18.89■□□□□ 0.61
HOXD8-204ENST00000544999 HLA-CQ95604 372 aa18.89■□□□□ 0.61
HOXD8-204ENST00000544999 TMEM143Q96AN5 459 aa18.89■□□□□ 0.61
HOXD8-204ENST00000544999 A0A0U1RQF3 1178 aa18.88■□□□□ 0.61
HOXD8-204ENST00000544999 CSDE1O75534 798 aaKnown RBP18.88■□□□□ 0.61
HOXD8-204ENST00000544999 XRCC6P12956 609 aaKnown RBP eCLIP18.88■□□□□ 0.61
HOXD8-204ENST00000544999 TECP42680 631 aa18.88■□□□□ 0.61
HOXD8-204ENST00000544999 TMEM117Q9H0C3 514 aa18.88■□□□□ 0.61
HOXD8-204ENST00000544999 IFT122Q9HBG6 1241 aa18.88■□□□□ 0.61
HOXD8-204ENST00000544999 TUFT1Q9NNX1 390 aa18.88■□□□□ 0.61
HOXD8-204ENST00000544999 BMP2KQ9NSY1 1161 aaPredicted RBP18.88■□□□□ 0.61
HOXD8-204ENST00000544999 ATG2AQ2TAZ0 1938 aa18.88■□□□□ 0.61
HOXD8-204ENST00000544999 GRM6O15303 877 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 DGAT1O75907 488 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 FGFR1P11362 822 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 RARRES1P49788 294 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 TFF2Q03403 129 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 LAMTOR4Q0VGL1 99 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 SRGAP1Q7Z6B7 1085 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 FERMT3Q86UX7 667 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 ERMNQ8TAM6 284 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 PRPF31Q8WWY3 499 aaKnown RBP18.87■□□□□ 0.61
HOXD8-204ENST00000544999 CCDC43Q96MW1 224 aaKnown RBP18.87■□□□□ 0.61
HOXD8-204ENST00000544999 POLR3CQ9BUI4 534 aaPredicted RBP18.87■□□□□ 0.61
HOXD8-204ENST00000544999 TRAIPQ9BWF2 469 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 NSUN3Q9H649 340 aaKnown RBP18.87■□□□□ 0.61
HOXD8-204ENST00000544999 XPNPEP1Q9NQW7 623 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 AAASQ9NRG9 546 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 RNF19AQ9NV58 838 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 PLAGL2Q9UPG8 496 aa18.87■□□□□ 0.61
HOXD8-204ENST00000544999 EOMESO95936 686 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 SPATA31C1P0DKV0 1188 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 GJB2P29033 226 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 SPOUT1Q5T280 376 aaKnown RBP18.86■□□□□ 0.61
HOXD8-204ENST00000544999 CATSPER4Q7RTX7 472 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 ZNF598Q86UK7 904 aaKnown RBP18.86■□□□□ 0.61
HOXD8-204ENST00000544999 CATSPER3Q86XQ3 398 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 C4orf32Q8N8J7 132 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 KLHL23Q8NBE8 558 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 CASD1Q96PB1 797 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 PIN4Q9Y237 131 aaKnown RBP18.86■□□□□ 0.61
HOXD8-204ENST00000544999 PRUNE2Q8WUY3 3088 aa18.86■□□□□ 0.61
HOXD8-204ENST00000544999 TRANK1O15050 2925 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 UNC80Q8N2C7 3258 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 MED24O75448 989 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 ITGB1P05556 798 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 SRGAP2CP0DJJ0 459 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 SKIP12755 728 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 RPA1P27694 616 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 TOB1P50616 345 aaPredicted RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 FXR2P51116 673 aaKnown RBP eCLIP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 MXD4Q14582 209 aaPredicted RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 NBR1Q14596 966 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 TCEAL5Q5H9L2 206 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 TWF2Q6IBS0 349 aaKnown RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 ABI1Q8IZP0 508 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 RNF149Q8NC42 400 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 SPPL3Q8TCT6 385 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 PIGOQ8TEQ8 1089 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 CWH43Q9H720 699 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 UBE2ZQ9H832 354 aaPredicted RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 ALG13Q9NP73 1137 aaKnown RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 TYW1Q9NV66 732 aaKnown RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.85■□□□□ 0.61
HOXD8-204ENST00000544999 PCDHB12Q9Y5F1 795 aa18.85■□□□□ 0.61
HOXD8-204ENST00000544999 BMP1P13497 986 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 ATF7P17544 494 aaPredicted RBP18.84■□□□□ 0.61
HOXD8-204ENST00000544999 LAG3P18627 525 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 MUTP22033 750 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 PHKA2P46019 1235 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 POU5F1BQ06416 359 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 CSPP1Q1MSJ5 1256 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 HAUS3Q68CZ6 603 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 LRRC43Q8N309 656 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 COLGALT1Q8NBJ5 622 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 RNF169Q8NCN4 708 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 NACC1Q96RE7 527 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 AGPAT5Q9NUQ2 364 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 DBR1Q9UK59 544 aaKnown RBP18.84■□□□□ 0.61
HOXD8-204ENST00000544999 SMC3Q9UQE7 1217 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 PCDHB6Q9Y5E3 794 aa18.84■□□□□ 0.61
HOXD8-204ENST00000544999 H3BQV1 296 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 LAD1O00515 517 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 ARL2P36404 184 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 RAB27AP51159 221 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 KCNQ1P51787 676 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 PTGDRQ13258 359 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 TFDP1Q14186 410 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 PCBP1Q15365 356 aaKnown RBP eCLIP18.83■□□□□ 0.6
HOXD8-204ENST00000544999 CLLU1OSQ5K130 101 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 MCTP1Q6DN14 999 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 IFNLR1Q8IU57 520 aaPredicted RBP18.83■□□□□ 0.6
HOXD8-204ENST00000544999 ADAMTS19Q8TE59 1207 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 POF1BQ8WVV4 589 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 RSPH1Q8WYR4 309 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 BACH2Q9BYV9 841 aa18.83■□□□□ 0.6
HOXD8-204ENST00000544999 MINDY3Q9H8M7 445 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms