RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ANKRD42Q8N9B4 389 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.23□□□□□ -1.415e-8■■■■■ 65.3
VPS50-220ENST00000544910 P3H4Q92791 437 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 RUSC1Q9BVN2 902 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 APEX2Q9UBZ4 518 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 MYH3P11055 1940 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 UBR2Q8IWV8 1755 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 A0A0U1RQJ8 604 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 LRRD1A4D1F6 860 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 WDR64B1ANS9 1081 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 GGPS1O95749 300 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 P4HA1P13674 534 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 QARSP47897 775 aaKnown RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 HDLBPQ00341 1268 aaKnown RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 KRT76Q01546 638 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 ZBTB17Q13105 803 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 SNX1Q13596 522 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 UAP1Q16222 522 aaPredicted RBP6.23□□□□□ -1.41
VPS50-220ENST00000544910 CEP55Q53EZ4 464 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 PFASO15067 1338 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 EMSYQ7Z589 1322 aa6.23□□□□□ -1.41
VPS50-220ENST00000544910 MYO1FO00160 1098 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 TRIM49P0CI25 452 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 TRIM49CP0CI26 452 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SLC9A1P19634 815 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 STX2P32856 288 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SREBF1P36956 1147 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 IRX4P78413 519 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 LMNB2Q03252 620 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ADCY2Q08462 1091 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 PRKG1Q13976 671 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 GIT2Q14161 759 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 GRIK5Q16478 980 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 COBLL1Q53SF7 1204 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CIAPIN1Q6FI81 312 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 GLYCTKQ8IVS8 523 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 UHMK1Q8TAS1 419 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 SLC35G2Q8TBE7 412 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CERKQ8TCT0 537 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 MRRFQ96E11 262 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 FAM163AQ96GL9 167 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 PSMD1Q99460 953 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 NUP85Q9BW27 656 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 TRIM4Q9C037 500 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SUGCTQ9HAC7 445 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 COL1A1P02452 1464 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 FAM187AA6NFU0 413 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 LRRIQ3A6PVS8 624 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 POLRMTO00411 1230 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 PHBP35232 272 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 PDCLQ13371 301 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 MIIPQ5JXC2 388 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 MMS22LQ6ZRQ5 1243 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ANKRD35Q8N283 1001 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 USP38Q8NB14 1042 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZNF564Q8TBZ8 553 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 WNT8AQ9H1J5 351 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 BLOC1S4Q9NUP1 217 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 DUSP10Q9Y6W6 482 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 DDX60Q8IY21 1712 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 ATF7P17544 494 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 PON1P27169 355 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 RXRBP28702 533 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 YWHABP31946 246 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 PMS2P54278 862 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SNX16P57768 344 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 PSMC5P62195 406 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 HADHQ16836 314 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 HHATQ5VTY9 493 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 PHLDB3Q6NSJ2 640 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 RSAD2Q8WXG1 361 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 GMCL1Q96IK5 515 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 DDX47Q9H0S4 455 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 UNC45AQ9H3U1 944 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 MRPL47Q9HD33 250 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 ARHGAP20Q9P2F6 1191 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZNF70Q9UC06 446 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 H3BQF6 201 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 MYO1CO00159 1063 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 RTN2O75298 545 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SASH3O75995 380 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ZRANB2O95218 330 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS50-220ENST00000544910 MYBL1P10243 752 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 PLS3P13797 630 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CD19P15391 556 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 VEGFAP15692 232 aaPredicted RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 CHRNA3P32297 505 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 DHX34Q14147 1143 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 MTERF2Q49AM1 385 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 C6orf118Q5T5N4 469 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 KAZNQ674X7 775 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 CCDC197Q8NCU1 140 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SCFD1Q8WVM8 642 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 MKNK1Q9BUB5 465 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 INTS9Q9NV88 658 aaKnown RBP6.22□□□□□ -1.41
VPS50-220ENST00000544910 HSPBP1Q9NZL4 362 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 ANAPC5Q9UJX4 755 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 INTUQ9ULD6 942 aa6.22□□□□□ -1.41
VPS50-220ENST00000544910 SLIT2O94813 1529 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms