RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 PTK2BQ14289 1009 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 NBPF9Q3BBW0 867 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 TEDDM1Q5T9Z0 273 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 EGFL8Q99944 293 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 CEP72Q9P209 647 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 MAP3K15Q6ZN16 1313 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 DAB1O75553 588 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 SERPINB2P05120 415 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 GPC5P78333 572 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 RESP18Q5W5W9 173 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 ZNF746Q6NUN9 644 aaPredicted RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 TMEM270Q6UE05 265 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 DTX3LQ8TDB6 740 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 RBM41Q96IZ5 413 aaKnown RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 CCDC17Q96LX7 622 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 PRMT1Q99873 361 aaKnown RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 C11orf70Q9BRQ4 267 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 BTNL9Q6UXG8 535 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 OSBPL9Q96SU4 736 aa16.45■□□□□ 0.22
CHD4-210ENST00000544040 ASCC2Q9H1I8 757 aaPredicted RBP16.45■□□□□ 0.22
CHD4-210ENST00000544040 GUCY1A3Q02108 690 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 TJAP1Q5JTD0 557 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 SLITRK6Q9H5Y7 841 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ATG3Q9NT62 314 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ADD3Q9UEY8 706 aaKnown RBP16.44■□□□□ 0.22
CHD4-210ENST00000544040 FGFR4P22455 802 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 MRPL28Q13084 256 aaKnown RBP16.44■□□□□ 0.22
CHD4-210ENST00000544040 WDR17Q8IZU2 1322 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 C1orf228Q6PIY5 440 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 SOX11P35716 441 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ATXN3P54252 364 aaPredicted RBP16.44■□□□□ 0.22
CHD4-210ENST00000544040 GPR162Q16538 588 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 CCDC92Q53HC0 331 aaPredicted RBP16.44■□□□□ 0.22
CHD4-210ENST00000544040 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ZNF564Q8TBZ8 553 aaPredicted RBP16.44■□□□□ 0.22
CHD4-210ENST00000544040 TEKT4Q8WW24 435 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ASPSCR1Q9BZE9 553 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 USP21Q9UK80 565 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 XDHP47989 1333 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ARHGAP10A1A4S6 786 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 ENO1P06733 434 aaKnown RBP16.44■□□□□ 0.22
CHD4-210ENST00000544040 PRR29P0C7W0 189 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 NCAPHQ15003 741 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 DCAF4L1Q3SXM0 396 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 GOLPH3LQ9H4A5 285 aa16.44■□□□□ 0.22
CHD4-210ENST00000544040 SLC9A5Q14940 896 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 ZNF667Q5HYK9 610 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 TEX2Q8IWB9 1127 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 OLFM3Q96PB7 478 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 KLC4Q9NSK0 619 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 ASNSD1Q9NWL6 643 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 KIAA1755Q5JYT7 1200 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 PPHLN1Q8NEY8 458 aaKnown RBP16.43■□□□□ 0.22
CHD4-210ENST00000544040 C1orf54Q8WWF1 131 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 GCNAQ96QF7 691 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 MRPL40Q9NQ50 206 aaKnown RBP16.43■□□□□ 0.22
CHD4-210ENST00000544040 UBA6A0AVT1 1052 aaPredicted RBP16.43■□□□□ 0.22
CHD4-210ENST00000544040 POTEMA6NI47 508 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 KDSRQ06136 332 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 FASTKD1Q53R41 847 aaKnown RBP16.43■□□□□ 0.22
CHD4-210ENST00000544040 DPY19L2Q6NUT2 758 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 ITSN2Q9NZM3 1697 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 CIAO1O76071 339 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 ELF1P32519 619 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 USP14P54578 494 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 NME3Q13232 169 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 DMC1Q14565 340 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 CEP55Q53EZ4 464 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 UBE4BO95155 1302 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 RASSF10A6NK89 507 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 GOLGA8RI6L899 631 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 SMARCA1P28370 1054 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 ERFEQ4G0M1 354 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 KRT39Q6A163 491 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 SFR1Q86XK3 245 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 USP6NLQ92738 828 aa16.43■□□□□ 0.22
CHD4-210ENST00000544040 CCNA1P78396 465 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 KDELC2Q7Z4H8 507 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 ANKMY2Q8IV38 441 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 EPAS1Q99814 870 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 SCN4BQ8IWT1 228 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 MTBPQ96DY7 904 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 FAM213AQ9BRX8 229 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 RUBCNLQ9H714 662 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 HPS4Q9NQG7 708 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 EHD2Q9NZN4 543 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 ADCY3O60266 1144 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 SURF1Q15526 300 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 TRIM60Q495X7 471 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 PPP4R3CPQ6ZMV5 832 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 ATP11BQ9Y2G3 1177 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 PRPF4O43172 522 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■■□□□ 12.1
CHD4-210ENST00000544040 TMCC1O94876 653 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 CIITAP33076 1130 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 PRCPP42785 496 aa16.42■□□□□ 0.22
CHD4-210ENST00000544040 CUL4AQ13619 759 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms