RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 KRBA2Q6ZNG9 492 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 ZNF410Q86VK4 478 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 FMR1NBQ8N0W7 255 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 FDXACB1Q9BRP7 624 aaPredicted RBP16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 CDHR5Q9HBB8 845 aa16.03■□□□□ 0.16
TNFRSF1A-216ENST00000543995 NR1I2O75469 434 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CSF2RAP15509 400 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MDM2Q00987 491 aaPredicted RBP16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 FPGSQ05932 587 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DMP1Q13316 513 aaPredicted RBP16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SNW1Q13573 536 aaKnown RBP16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CAPSQ13938 189 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GIT2Q14161 759 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DEFB128Q7Z7B8 93 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GCOM2Q9BZD3 368 aaPredicted RBP16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ADAMTS10Q9H324 1103 aa16.02■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CCDC169A6NNP5 214 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 KINO60870 393 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GHRP10912 638 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 IDEP14735 1019 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 RFC2P35250 354 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NAMPTP43490 491 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PHKA2P46019 1235 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PEX3P56589 373 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ASIC1P78348 528 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 FBXO47Q5MNV8 452 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 KANK3Q6NY19 840 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GRAMD1CQ8IYS0 662 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DAW1Q8N136 415 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MYCT1Q8N699 235 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DEPTORQ8TB45 409 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 BSNDQ8WZ55 320 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PAGE5Q96GU1 130 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 BLZF1Q9H2G9 400 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 C17orf75Q9HAS0 396 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PARVGQ9HBI0 331 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 LARSQ9P2J5 1176 aaKnown RBP16.01■□□□□ 0.15
TNFRSF1A-216ENST00000543995 H0YGN5 161 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NBNO60934 754 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PLS3P13797 630 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MAPK7Q13164 816 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PPIGQ13427 754 aaKnown RBP eCLIP16■□□□□ 0.156e-8■■■■□ 21.4
TNFRSF1A-216ENST00000543995 MBTPS1Q14703 1052 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 RPUSD2Q8IZ73 545 aaKnown RBP16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 USP38Q8NB14 1042 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TMEM40Q8WWA1 233 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TRIM9Q9C026 710 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 INO80BQ9C086 356 aaPredicted RBP16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 IFT122Q9HBG6 1241 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 KCNG1Q9UIX4 513 aa16■□□□□ 0.15
TNFRSF1A-216ENST00000543995 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CSDE1O75534 798 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 RPS6KA5O75582 802 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DARSP14868 501 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 EIF4BP23588 611 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CASP1P29466 404 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SMTNP53814 917 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 POU5F1BQ06416 359 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PAK2Q13177 524 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CUL4BQ13620 913 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 LPIN1Q14693 890 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ODR4Q5SWX8 454 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TSHZ1Q6ZSZ6 1077 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ZBTB8OSQ8IWT0 167 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CCDC65Q8IXS2 484 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DNAJC19Q96DA6 116 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TIGD1Q96MW7 591 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 KIFC3Q9BVG8 833 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 KMT5AQ9NQR1 393 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PANK4Q9NVE7 773 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 DACT1Q9NYF0 836 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 HOOK1Q9UJC3 728 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NOC2LQ9Y3T9 749 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SQORQ9Y6N5 450 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 TRAK2O60296 914 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MYL1P05976 194 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ACRP10323 421 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SFPQP23246 707 aaKnown RBP eCLIP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 CD52P31358 61 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NPTX2P47972 431 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PTENP60484 403 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 NFX1Q12986 1120 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GPNMBQ14956 572 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 SRGAP1Q7Z6B7 1085 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 IFIH1Q9BYX4 1025 aaKnown RBP15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 OSBPL7Q9BZF2 842 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 C2orf40Q9H1Z8 148 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 IL23AQ9NPF7 189 aa15.99■□□□□ 0.15
TNFRSF1A-216ENST00000543995 RBAK-RBAKDNI3L0D1 243 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GPR182O15218 404 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 PFKMP08237 780 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 GAP43P17677 238 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 FGFR4P22455 802 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 MAGEA10P43363 369 aaPredicted RBP15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 ZNF131P52739 623 aa15.98■□□□□ 0.15
TNFRSF1A-216ENST00000543995 POSTNQ15063 836 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms