RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 NIFKQ9BYG3 293 aaKnown RBP25.48■■□□□ 1.67
CDKN3-207ENST00000543789 ADAM7Q9H2U9 754 aa25.48■■□□□ 1.67
CDKN3-207ENST00000543789 SH3GLB2Q9NR46 395 aa25.48■■□□□ 1.67
CDKN3-207ENST00000543789 HCFC2Q9Y5Z7 792 aa25.48■■□□□ 1.67
CDKN3-207ENST00000543789 SP100P23497 879 aaPredicted RBP25.47■■□□□ 1.67
CDKN3-207ENST00000543789 BCAR1P56945 870 aa25.47■■□□□ 1.67
CDKN3-207ENST00000543789 ITIH3Q06033 890 aa25.47■■□□□ 1.67
CDKN3-207ENST00000543789 DRP2Q13474 957 aa25.47■■□□□ 1.67
CDKN3-207ENST00000543789 TSHZ2Q9NRE2 1034 aa25.47■■□□□ 1.67
CDKN3-207ENST00000543789 EVPLQ92817 2033 aa25.47■■□□□ 1.67
CDKN3-207ENST00000543789 NT5C1B-RDH14C9J2C7 533 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 CLASP2O75122 1294 aaKnown RBP25.46■■□□□ 1.67
CDKN3-207ENST00000543789 PSMD10O75832 226 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 CXCL14O95715 111 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 PSMA5P28066 241 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 PDIA3P30101 505 aaKnown RBP25.46■■□□□ 1.67
CDKN3-207ENST00000543789 AVPR2P30518 371 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 DNM2P50570 870 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 CCT2P78371 535 aaKnown RBP25.46■■□□□ 1.67
CDKN3-207ENST00000543789 Q4G0T1 1027 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 XKR3Q5GH77 459 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 MIER3Q7Z3K6 550 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 TBCKQ8TEA7 893 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 NECTIN4Q96NY8 510 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 C22orf23Q9BZE7 217 aa25.46■■□□□ 1.67
CDKN3-207ENST00000543789 SEPT9Q9UHD8 586 aaPredicted RBP25.46■■□□□ 1.67
CDKN3-207ENST00000543789 CA8P35219 290 aa25.45■■□□□ 1.66
CDKN3-207ENST00000543789 VCPP55072 806 aaKnown RBP25.45■■□□□ 1.66
CDKN3-207ENST00000543789 MTERF2Q49AM1 385 aa25.45■■□□□ 1.66
CDKN3-207ENST00000543789 RSPH1Q8WYR4 309 aa25.45■■□□□ 1.66
CDKN3-207ENST00000543789 TMEM169Q96HH4 297 aa25.45■■□□□ 1.66
CDKN3-207ENST00000543789 TRAIPQ9BWF2 469 aa25.45■■□□□ 1.66
CDKN3-207ENST00000543789 NCOA5Q9HCD5 579 aaKnown RBP25.45■■□□□ 1.66
CDKN3-207ENST00000543789 CDH22Q9UJ99 828 aa25.45■■□□□ 1.66
CDKN3-207ENST00000543789 CYP3A7-CYP3A51PA0A087WV96 503 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 IGKV6-21A0A0C4DH24 114 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 CYP3A7P24462 503 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 PHKA2P46019 1235 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 EVCP57679 992 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 VPS52Q8N1B4 723 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 TMEM87AQ8NBN3 555 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 KREMEN2Q8NCW0 462 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 CEP89Q96ST8 783 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 INO80BQ9C086 356 aaPredicted RBP25.44■■□□□ 1.66
CDKN3-207ENST00000543789 PCDHA4Q9UN74 947 aa25.44■■□□□ 1.66
CDKN3-207ENST00000543789 A0A087WZ62 844 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 CARNS1A5YM72 827 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 STBD1O95210 358 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 SKIP12755 728 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 SFPQP23246 707 aaKnown RBP eCLIP25.43■■□□□ 1.66
CDKN3-207ENST00000543789 TWF2Q6IBS0 349 aaKnown RBP25.43■■□□□ 1.66
CDKN3-207ENST00000543789 TRIM22Q8IYM9 498 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 RIPOR3Q96MK2 946 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 FDXACB1Q9BRP7 624 aaPredicted RBP25.43■■□□□ 1.66
CDKN3-207ENST00000543789 POMKQ9H5K3 350 aa25.43■■□□□ 1.66
CDKN3-207ENST00000543789 SUCLA2Q9P2R7 463 aaPredicted RBP25.43■■□□□ 1.66
CDKN3-207ENST00000543789 TMEM150BA6NC51 233 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 DDX11L8A8MPP1 907 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 ZC3H11AO75152 810 aaKnown RBP eCLIP25.42■■□□□ 1.66
CDKN3-207ENST00000543789 MTHFRP42898 656 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 SSRP1Q08945 709 aaKnown RBP25.42■■□□□ 1.66
CDKN3-207ENST00000543789 B3GNT9Q6UX72 402 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 ZNF410Q86VK4 478 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 UBALD2Q8IYN6 164 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 SH2D3AQ9BRG2 576 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 IRF2BPLQ9H1B7 796 aa25.42■■□□□ 1.66
CDKN3-207ENST00000543789 C2CD4DB7Z1M9 353 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 GIT2Q14161 759 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 GLB1LQ6UWU2 654 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 DDX53Q86TM3 631 aaKnown RBP25.41■■□□□ 1.66
CDKN3-207ENST00000543789 RHPN2Q8IUC4 686 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 LPPQ93052 612 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 ZBP1Q9H171 429 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 SORCS3Q9UPU3 1222 aa25.41■■□□□ 1.66
CDKN3-207ENST00000543789 PIN4Q9Y237 131 aaKnown RBP25.41■■□□□ 1.66
CDKN3-207ENST00000543789 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.4■■□□□ 1.66
CDKN3-207ENST00000543789 MAFO75444 373 aaPredicted RBP25.4■■□□□ 1.66
CDKN3-207ENST00000543789 TDP2O95551 362 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 CTSAP10619 480 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 POLGP54098 1239 aaPredicted RBP25.4■■□□□ 1.66
CDKN3-207ENST00000543789 MTMR3Q13615 1198 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 LONRF3Q496Y0 759 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 NOMO2Q5JPE7 1267 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 ATAT1Q5SQI0 421 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 RARS2Q5T160 578 aaKnown RBP25.4■■□□□ 1.66
CDKN3-207ENST00000543789 TMEM173Q86WV6 379 aaPredicted RBP25.4■■□□□ 1.66
CDKN3-207ENST00000543789 C12orf76Q8N812 135 aaPredicted RBP25.4■■□□□ 1.66
CDKN3-207ENST00000543789 IGSF21Q96ID5 467 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 NRDE2Q9H7Z3 1164 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 FAM105AQ9NUU6 356 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 TBC1D13Q9NVG8 400 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 DZANK1Q9NVP4 752 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 IRAK3Q9Y616 596 aa25.4■■□□□ 1.66
CDKN3-207ENST00000543789 ZDBF2Q9HCK1 2354 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 MYH9P35579 1960 aaKnown RBP25.39■■□□□ 1.66
CDKN3-207ENST00000543789 ZNF623O75123 536 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 PDGFBP01127 241 aaPredicted RBP25.39■■□□□ 1.66
CDKN3-207ENST00000543789 GALTP07902 379 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 WEE2P0C1S8 567 aa25.39■■□□□ 1.66
CDKN3-207ENST00000543789 NUBP1P53384 320 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms