RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 SP100P23497 879 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 SMARCA1P28370 1054 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 PSMC4P43686 418 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 IFI35P80217 286 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 OCRLQ01968 901 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 SBK1Q52WX2 424 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 ZC3H12AQ5D1E8 599 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 IRF2BP2Q7Z5L9 587 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 NLRP10Q86W26 655 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 RHOT2Q8IXI1 618 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 ZC3H3Q8IXZ2 948 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 ANKRD35Q8N283 1001 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 RIBC1Q8N443 379 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 KCTD17Q8N5Z5 321 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 PRCCQ92733 491 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 GBP5Q96PP8 586 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 NAP1L4Q99733 375 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 PACSIN1Q9BY11 444 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 CRNKL1Q9BZJ0 848 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 TRIM31Q9BZY9 425 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 MIS12Q9H081 205 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 NT5C3AQ9H0P0 336 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 EPB41L4BQ9H329 900 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 SAR1AQ9NR31 198 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 TYW1Q9NV66 732 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 IL1RAPL1Q9NZN1 696 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 ARPP21Q9UBL0 812 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 STARD13Q9Y3M8 1113 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 MYH4Q9Y623 1939 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 UBR2Q8IWV8 1755 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 BCL9O00512 1426 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 PFASO15067 1338 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 FAM205AQ6ZU69 1335 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 KDM3AQ9Y4C1 1321 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 TMEM120BA0PK00 339 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 TSPY2A6NKD2 308 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 ECE2O60344 883 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 PEX11AO75192 247 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 ZWINTO95229 277 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 PENKP01210 267 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 AFPP02771 609 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 SHBGP04278 402 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 IMPDH2P12268 514 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 MAN1A1P33908 653 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 STAT1P42224 750 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 POLGP54098 1239 aaPredicted RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 YARSP54577 528 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 ARID5AQ03989 594 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 BARGINQ6ZT62 677 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 KRT28Q7Z3Y7 464 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 EXOC3L1Q86VI1 746 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 RBM12BQ8IXT5 1001 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 KIF2BQ8N4N8 673 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 FITM2Q8N6M3 262 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 MIGA1Q8NAN2 632 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 LRRC8CQ8TDW0 803 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 MAIP1Q8WWC4 291 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 RBM41Q96IZ5 413 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 TRIM51Q9BSJ1 452 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 TIPINQ9BVW5 301 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 PLVAPQ9BX97 442 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 CELF4Q9BZC1 486 aaKnown RBP5.38□□□□□ -1.55
LMO3-229ENST00000543721 HDAC9Q9UKV0 1011 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 TMCO1Q9UM00 188 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 NENFQ9UMX5 172 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 SH3BP1Q9Y3L3 701 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 MYH3P11055 1940 aa5.38□□□□□ -1.55
LMO3-229ENST00000543721 GTPBP10A4D1E9 387 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 CCNT1O60563 726 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 KRT13P13646 458 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 RPL13P26373 211 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 MAGEA8P43361 318 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 HADHBP55084 474 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 ZC3H6P61129 1189 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 GRB10Q13322 594 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ADAM9Q13443 819 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 EXOC3L4Q17RC7 722 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 SEL1L2Q5TEA6 688 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ZDHHC24Q6UX98 284 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 SYDE1Q6ZW31 735 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 ZNF571Q7Z3V5 609 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 ARHGAP24Q8N264 748 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 FBXO22Q8NEZ5 403 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 FBXO25Q8TCJ0 367 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ZNF398Q8TD17 642 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 KCNV2Q8TDN2 545 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 LRRC37BQ96QE4 947 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 NR1H4Q96RI1 486 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 TGS1Q96RS0 853 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 PITPNM3Q9BZ71 974 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 KCNK9Q9NPC2 374 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 UBN1Q9NPG3 1134 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 BLOC1S4Q9NUP1 217 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ARMCX3Q9UH62 379 aaPredicted RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 TRMT112Q9UI30 125 aaKnown RBP5.37□□□□□ -1.55
LMO3-229ENST00000543721 USP20Q9Y2K6 914 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 SNX24Q9Y343 169 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 C10orf71Q711Q0 1435 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 ESYT2A0FGR8 921 aa5.37□□□□□ -1.55
LMO3-229ENST00000543721 SMIM23A6NLE4 172 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms