RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 VCXQ9H320 206 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 VCX3BQ9H321 246 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 ZWILCHQ9H900 591 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 GINM1Q9NU53 330 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 PI4KBQ9UBF8 816 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 CNOT8Q9UFF9 292 aaKnown RBP13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 ANAPC4Q9UJX5 808 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 ZSCAN5CA6NGD5 496 aaPredicted RBP13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 SASH3O75995 380 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 KRT1P04264 644 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 PDE1BQ01064 536 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 GJB7Q6PEY0 223 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 FOXR1Q6PIV2 292 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 RFX6Q8HWS3 928 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 ZFPM1Q8IX07 1006 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 MAIP1Q8WWC4 291 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 DYDC2Q96IM9 177 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 CCDC17Q96LX7 622 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 ZIM3Q96PE6 472 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 CCT8L2Q96SF2 557 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 KLHL11Q9NVR0 708 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 HPCAL4Q9UM19 191 aa13.91□□□□□ -0.18
TUBGCP2-210ENST00000543663 SLC16A4O15374 487 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 SPAG7O75391 227 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 PPP1R37O75864 691 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 MSH2P43246 934 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 PDE1CQ14123 709 aaPredicted RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 CDC42EP5Q6NZY7 148 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 RBM43Q6ZSC3 357 aaKnown RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 GUF1Q8N442 669 aaKnown RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 SLC30A5Q8TAD4 765 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 GRK7Q8WTQ7 553 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 TTC17Q96AE7 1141 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 ARL8AQ96BM9 186 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 MPHOSPH6Q99547 160 aaKnown RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 EHD4Q9H223 541 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 TAF1DQ9H5J8 278 aaPredicted RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 SAYSD1Q9NPB0 183 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 TYW1Q9NV66 732 aaKnown RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 RASA4BC9J798 803 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 RASA4O43374 803 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 NPR1P16066 1061 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 ATP6V1G3Q96LB4 118 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 DBR1Q9UK59 544 aaKnown RBP13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 LAMB4A4D0S4 1761 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 SPEF2Q9C093 1822 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 CNTNAP4Q9C0A0 1308 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 CYTH3O43739 400 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 SRGAP2CP0DJJ0 459 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 BRAFP15056 766 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 MARK3P27448 753 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 CCDC14Q49A88 953 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 SYDE2Q5VT97 1194 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 ARHGAP24Q8N264 748 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 HPSEQ9Y251 543 aa13.9□□□□□ -0.18
TUBGCP2-210ENST00000543663 STAT2P52630 851 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PSMD2Q13200 908 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 SULF1Q8IWU6 871 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 MCUQ8NE86 351 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 MAML1Q92585 1016 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PNMA2Q9UL42 364 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 GOLGA8RI6L899 631 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZBTB5O15062 677 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 SRGNP10124 158 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PDHBP11177 359 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PPP2R2AP63151 447 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 KNOP1Q1ED39 458 aaKnown RBP13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 KIRREL3Q8IZU9 778 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PFDN4Q9NQP4 134 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 COL18A1P39060 1754 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 HADHQ16836 314 aaKnown RBP13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 CC2D2BQ6DHV5 1058 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PDXDC1Q6P996 788 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 THNSL1Q8IYQ7 743 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 YIPF3Q9GZM5 350 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 ARFGEF2Q9Y6D5 1785 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 STXBP3O00186 592 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 CHUKO15111 745 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 ATMINO43313 823 aaPredicted RBP13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 RAD51CO43502 376 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 RWDD2BP57060 319 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZNF384Q8TF68 577 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 C9orf72Q96LT7 481 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 RAB3IPQ96QF0 476 aaPredicted RBP13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 DDX4Q9NQI0 724 aaKnown RBP13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 PRDM4Q9UKN5 801 aa13.89□□□□□ -0.19
TUBGCP2-210ENST00000543663 C5P01031 1676 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 PI4K2BG5E9Z4 385 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 SLC37A4O43826 429 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 KITP10721 976 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 CUL1Q13616 776 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 Q3C1V9 767 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 ZC2HC1CQ53FD0 456 aaPredicted RBP13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 HDAC7Q8WUI4 952 aa13.88□□□□□ -0.19
TUBGCP2-210ENST00000543663 MASTLQ96GX5 879 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms