RNA–Protein interactions for RNA: ENST00000543510.1

TMEM258-207, Transcript of transmembrane protein 258, humanhuman

TSL 2 BASIC

Gene TMEM258, Length 1,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-207ENST00000543510 RNF180Q86T96 592 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 METTL13Q8N6R0 699 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 KAT2BQ92831 832 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 DRC1Q96MC2 740 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 VPS16Q9H269 839 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 MRPL44Q9H9J2 332 aaKnown RBP16.5■□□□□ 0.23
TMEM258-207ENST00000543510 PARVGQ9HBI0 331 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 ODF2LQ9ULJ1 636 aa16.5■□□□□ 0.23
TMEM258-207ENST00000543510 TRIP12Q14669 1992 aaPredicted RBP16.49■□□□□ 0.23
TMEM258-207ENST00000543510 MSCO60682 206 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 F2P00734 622 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 SFPQP23246 707 aaKnown RBP eCLIP16.49■□□□□ 0.23
TMEM258-207ENST00000543510 TARBP2Q15633 366 aaKnown RBP16.49■□□□□ 0.23
TMEM258-207ENST00000543510 PTPN21Q16825 1174 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 ZNF484Q5JVG2 852 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 LRRC71Q8N4P6 559 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 MCPH1Q8NEM0 835 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 MTG1Q9BT17 334 aaPredicted RBP16.49■□□□□ 0.23
TMEM258-207ENST00000543510 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 RNF208Q9H0X6 261 aa16.49■□□□□ 0.23
TMEM258-207ENST00000543510 POLR3FQ9H1D9 316 aaPredicted RBP16.49■□□□□ 0.23
TMEM258-207ENST00000543510 HTTP42858 3142 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 CCDC169A6NNP5 214 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 KPNA6O60684 536 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 ASGR1P07306 291 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 SMIM10L2AP0DMW4 78 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 SMIM10L2BP0DMW5 78 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 PBX1P40424 430 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 PEX3P56589 373 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 GRIK4Q16099 956 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 FAM47CQ5HY64 1035 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 DAW1Q8N136 415 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 SCFD1Q8WVM8 642 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 TIPINQ9BVW5 301 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 FGFBP2Q9BYJ0 223 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 XPNPEP1Q9NQW7 623 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 SETD4Q9NVD3 440 aa16.48■□□□□ 0.23
TMEM258-207ENST00000543510 ZBTB42B2RXF5 422 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 GCNT3O95395 438 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 TPM2P07951 284 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 SKILP12757 684 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 CCL5P13501 91 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 KLRC1P26715 233 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 NMT1P30419 496 aaKnown RBP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 CCZ1BP86790 482 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 CCZ1P86791 482 aaPredicted RBP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 MAPK7Q13164 816 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 NOLC1Q14978 699 aaKnown RBP eCLIP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 FAM178BQ8IXR5 827 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 C7orf31Q8N865 590 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 PCSK9Q8NBP7 692 aaKnown RBP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 CNOT6LQ96LI5 555 aaKnown RBP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 DEFB118Q96PH6 123 aa16.47■□□□□ 0.23
TMEM258-207ENST00000543510 DHX33Q9H6R0 707 aaKnown RBP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 LARSQ9P2J5 1176 aaKnown RBP16.47■□□□□ 0.23
TMEM258-207ENST00000543510 K7ENM7 598 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 NRDCO43847 1150 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 MYBP10242 640 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 ZCWPW2Q504Y3 356 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 LHX8Q68G74 356 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 EFCAB12Q6NXP0 572 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 FBXO46Q6PJ61 603 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 EPM2AIP1Q7L775 607 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 NELFCDQ8IXH7 590 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 RETREG2Q8NC44 543 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 KIFAP3Q92845 792 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 IFT74Q96LB3 600 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 CEP89Q96ST8 783 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 TUBGCP2Q9BSJ2 902 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 OLFML3Q9NRN5 406 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 COL1A2P08123 1366 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 ITIH6Q6UXX5 1313 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 SLC16A4O15374 487 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 PLS3P13797 630 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 MTIF2P46199 727 aaKnown RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 CLCN3P51790 818 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 FKBP3Q00688 224 aaKnown RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 UBXN1Q04323 297 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 DMP1Q13316 513 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 DRP2Q13474 957 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 KLHDC9Q8NEP7 349 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 ZNF668Q96K58 619 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 PPP1R16BQ96T49 567 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 JPH2Q9BR39 696 aaPredicted RBP16.46■□□□□ 0.23
TMEM258-207ENST00000543510 KIFC3Q9BVG8 833 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 KCTD10Q9H3F6 313 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 PDLIM7Q9NR12 457 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 SEL1LQ9UBV2 794 aa16.46■□□□□ 0.23
TMEM258-207ENST00000543510 LGALS16A8MUM7 142 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 PRPF6O94906 941 aaKnown RBP16.45■□□□□ 0.22
TMEM258-207ENST00000543510 DNM2P50570 870 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 CASP5P51878 434 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 ZNF131P52739 623 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 NBPF20Q3BBV1 942 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 ZC2HC1CQ53FD0 456 aaPredicted RBP16.45■□□□□ 0.22
TMEM258-207ENST00000543510 MTHFD1LQ6UB35 978 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
TMEM258-207ENST00000543510 LRRC55Q6ZSA7 311 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms