RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 RNF139Q8WU17 664 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 INTS2Q9H0H0 1204 aaKnown RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 EPC1Q9H2F5 836 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 PPARGP37231 505 aaPredicted RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 PAPOLAP51003 745 aaKnown RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 CDR2Q01850 454 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 HP1BP3Q5SSJ5 553 aaPredicted RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 RFFLQ8WZ73 363 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 TBXAS1P24557 533 aaPredicted RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 VAMP7P51809 220 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 SCG3Q8WXD2 468 aaKnown RBP13.99□□□□□ -0.17
TNC-212ENST00000542877 WDR24Q96S15 920 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 DONSONQ9NYP3 566 aa13.99□□□□□ -0.17
TNC-212ENST00000542877 ZSCAN20P17040 1043 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 AP2B1P63010 937 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 ZNF211Q13398 564 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 KIF22Q14807 665 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 PPP6R3Q5H9R7 873 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 ECT2Q9H8V3 914 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 UBN1Q9NPG3 1134 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 FTLP02792 175 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 MCF2P10911 925 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 CCDC137Q6PK04 289 aaKnown RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 RYBPQ8N488 228 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 ZBTB18Q99592 522 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 YY1AP1Q9H869 796 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 ETNK1Q9HBU6 452 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 IP6K2Q9UHH9 426 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 FBXL5Q9UKA1 691 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 COPS2P61201 443 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 YWHAHQ04917 246 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 KIF19Q2TAC6 998 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 TRIM59Q8IWR1 403 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 C11orf70Q9BRQ4 267 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 SPDYE2BA6NHP3 402 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 CLDN3O15551 220 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 KRT7P08729 469 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 SPDYE6P0CI01 402 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 VSNL1P62760 191 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 MTMR1Q13613 665 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 TMEM270Q6UE05 265 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 ENOSF1Q7L5Y1 443 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 GCOM2Q9BZD3 368 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 DCP1AQ9NPI6 582 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 POTEB3A0JP26 581 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 POTECB2RU33 542 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 KIF28PB7ZC32 967 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 F8W8V4 182 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 FOXP2O15409 715 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 SOX5P35711 763 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 POTEBQ6S5H4 581 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 LCA5Q86VQ0 697 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 RHOT1Q8IXI2 618 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 OR6B3Q8NGW1 331 aa13.98□□□□□ -0.17
TNC-212ENST00000542877 DDX56Q9NY93 547 aaKnown RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 KLHL8Q9P2G9 620 aaPredicted RBP13.98□□□□□ -0.17
TNC-212ENST00000542877 A0A1B0GTH6 734 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 SLC4A1P02730 911 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 TNFAIP2Q03169 654 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 RC3H1Q5TC82 1133 aaKnown RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 SNX12Q9UMY4 172 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 KRT76Q01546 638 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 TRIM72Q6ZMU5 477 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 FRMD5Q7Z6J6 570 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 METTL16Q86W50 562 aaKnown RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 ATP11CQ8NB49 1132 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 RNF25Q96BH1 459 aaPredicted RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 UTYO14607 1347 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 KRT14P02533 472 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 STAG2Q8N3U4 1231 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 UBE4BO95155 1302 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 LAMC1P11047 1609 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 ASNSP08243 561 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 SMARCA1P28370 1054 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 EPHB1P54762 984 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 SNAP25P60880 206 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 CCZ1BP86790 482 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 CCZ1P86791 482 aaPredicted RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 DYNC1I2Q13409 638 aaKnown RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 ZNF699Q32M78 642 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 THNSL1Q8IYQ7 743 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 DYDC2Q96IM9 177 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 NLRP4Q96MN2 994 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 POLR3CQ9BUI4 534 aaPredicted RBP13.97□□□□□ -0.17
TNC-212ENST00000542877 NBPF3Q9H094 633 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 ITIH6Q6UXX5 1313 aa13.97□□□□□ -0.17
TNC-212ENST00000542877 ANXA13P27216 316 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 NOP14P78316 857 aaKnown RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 BTBD6Q96KE9 485 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 KIF2CQ99661 725 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 KLC4Q9NSK0 619 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 SENP1Q9P0U3 644 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 FBXO2Q9UK22 296 aaPredicted RBP13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L15C9J2P7 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L13C9JLJ4 530 aa13.96□□□□□ -0.17
TNC-212ENST00000542877 USP17L11C9JVI0 530 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms