RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 BMP2KQ9NSY1 1161 aaPredicted RBP18.35■□□□□ 0.53
CCND1-205ENST00000542367 HCSTQ9UBK5 93 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 BRWD1Q9NSI6 2320 aa18.35■□□□□ 0.53
CCND1-205ENST00000542367 TTC28Q96AY4 2481 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 A0A0U1RQF3 1178 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 HOXA2O43364 376 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 SFPQP23246 707 aaKnown RBP eCLIP18.34■□□□□ 0.53
CCND1-205ENST00000542367 LEXMQ3ZCV2 418 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 EP400NLQ6ZTU2 488 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 RNF169Q8NCN4 708 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 PRPF31Q8WWY3 499 aaKnown RBP18.34■□□□□ 0.53
CCND1-205ENST00000542367 PABPC5Q96DU9 382 aaKnown RBP18.34■□□□□ 0.53
CCND1-205ENST00000542367 CASD1Q96PB1 797 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 TMEM117Q9H0C3 514 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 FOXP1Q9H334 677 aaPredicted RBP18.34■□□□□ 0.53
CCND1-205ENST00000542367 IFT122Q9HBG6 1241 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 CHST12Q9NRB3 414 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 RNF19AQ9NV58 838 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 DACT1Q9NYF0 836 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 COL4A3BPQ9Y5P4 624 aa18.34■□□□□ 0.53
CCND1-205ENST00000542367 EOMESO95936 686 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 SRGAP2CP0DJJ0 459 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 EMC2Q15006 297 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 RABEP1Q15276 862 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 ABI1Q8IZP0 508 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.33■□□□□ 0.52
CCND1-205ENST00000542367 NEK9Q8TD19 979 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 POF1BQ8WVV4 589 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 PSPC1Q8WXF1 523 aaKnown RBP18.33■□□□□ 0.52
CCND1-205ENST00000542367 CWH43Q9H720 699 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 CLDND1Q9NY35 253 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 ATG2AQ2TAZ0 1938 aa18.33■□□□□ 0.52
CCND1-205ENST00000542367 H3BQ06 376 aaPredicted RBP18.32■□□□□ 0.52
CCND1-205ENST00000542367 NCK2O43639 380 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
CCND1-205ENST00000542367 LYPLA2O95372 231 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 LAMTOR4Q0VGL1 99 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 HYAL1Q12794 435 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
CCND1-205ENST00000542367 COL19A1Q14993 1142 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 ZNF174Q15697 407 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 CLLU1OSQ5K130 101 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 TWF2Q6IBS0 349 aaKnown RBP18.32■□□□□ 0.52
CCND1-205ENST00000542367 LRRC55Q6ZSA7 311 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 CATSPER4Q7RTX7 472 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 ZNF598Q86UK7 904 aaKnown RBP18.32■□□□□ 0.52
CCND1-205ENST00000542367 COLGALT1Q8NBJ5 622 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 TCP11Q8WWU5 503 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 IGFLR1Q9H665 355 aa18.32■□□□□ 0.52
CCND1-205ENST00000542367 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
CCND1-205ENST00000542367 A0A087WWV3 80 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 POTEMA6NI47 508 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 ASAP2O43150 1006 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 ST18O60284 1047 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 FGF18O76093 207 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 ATF7P17544 494 aaPredicted RBP18.31■□□□□ 0.52
CCND1-205ENST00000542367 GTF2F1P35269 517 aaKnown RBP eCLIP18.31■□□□□ 0.52
CCND1-205ENST00000542367 IRS1P35568 1242 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 PHKA2P46019 1235 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 FERMT3Q86UX7 667 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 THNSL1Q8IYQ7 743 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 MTRQ99707 1265 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 ANKEF1Q9NU02 776 aa18.31■□□□□ 0.52
CCND1-205ENST00000542367 LAG3P18627 525 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 LTBRP36941 435 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 TECP42680 631 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 UBE3AQ05086 875 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 CTC1Q2NKJ3 1217 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 PTCRAQ6ISU1 281 aaPredicted RBP18.3■□□□□ 0.52
CCND1-205ENST00000542367 SRGAP1Q7Z6B7 1085 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 NOSTRINQ8IVI9 506 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 LRRC43Q8N309 656 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 RNF149Q8NC42 400 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 HELQQ8TDG4 1101 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 PIGOQ8TEQ8 1089 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 TRAIPQ9BWF2 469 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 MINDY3Q9H8M7 445 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
CCND1-205ENST00000542367 XPNPEP1Q9NQW7 623 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 FAM105AQ9NUU6 356 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 PLXNA4Q9HCM2 1894 aa18.3■□□□□ 0.52
CCND1-205ENST00000542367 ARID2Q68CP9 1835 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 GRXCR2A6NFK2 248 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 OR52Z1P0C646 297 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 SPATA31C1P0DKV0 1188 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 IL9P15248 144 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 RARRES1P49788 294 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 ORC2Q13416 577 aaPredicted RBP18.29■□□□□ 0.52
CCND1-205ENST00000542367 CSPP1Q1MSJ5 1256 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 LONRF3Q496Y0 759 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 TTC38Q5R3I4 469 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 KCNT2Q6UVM3 1135 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 ADGRD2Q7Z7M1 963 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 MICAL1Q8TDZ2 1067 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 CCDC43Q96MW1 224 aaKnown RBP18.29■□□□□ 0.52
CCND1-205ENST00000542367 AGPAT5Q9NUQ2 364 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 PCDHGC5Q9Y5F6 944 aa18.29■□□□□ 0.52
CCND1-205ENST00000542367 DGAT1O75907 488 aa18.28■□□□□ 0.52
CCND1-205ENST00000542367 SKIP12755 728 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms