RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PEX19P40855 299 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 SP4Q02446 784 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 TMEM62Q0P6H9 643 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 SMC1AQ14683 1233 aaKnown RBP8.8□□□□□ -1
NPIPB4-215ENST00000542133 GNPTABQ3T906 1256 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 SPECC1Q5M775 1068 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 IER5Q5VY09 327 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 CCDC149Q6ZUS6 474 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 OTOP3Q7RTS5 596 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 TMC7Q7Z402 723 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 C1orf210Q8IVY1 113 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
NPIPB4-215ENST00000542133 COL26A1Q96A83 441 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 JMJD4Q9H9V9 463 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 MAP3K20Q9NYL2 800 aaKnown RBP8.8□□□□□ -1
NPIPB4-215ENST00000542133 WNT16Q9UBV4 365 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 PCDHB7Q9Y5E2 793 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 FRYQ5TBA9 3013 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 PATJQ8NI35 1801 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 FRMPD4Q14CM0 1322 aa8.8□□□□□ -1
NPIPB4-215ENST00000542133 C2orf16Q68DN1 1984 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 SPEGQ15772 3267 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 CACNA1IQ9P0X4 2223 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 BICDL2A1A5D9 508 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 SPATA31C2B4DYI2 1134 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 M0QZ92 97 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 SPTLC1O15269 473 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 FIBPO43427 364 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 PPP1R11O60927 126 aaPredicted RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 DCNP07585 359 aaKnown RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 FGFR1P11362 822 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 MARK3P27448 753 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 TCF7P36402 384 aaPredicted RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 PBX3P40426 434 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 MRPS9P82933 396 aaKnown RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 TMEM266Q2M3C6 531 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 UVSSAQ2YD98 709 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 ASPRV1Q53RT3 343 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 SMYD5Q6GMV2 418 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 KCNT2Q6UVM3 1135 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 MAML2Q8IZL2 1156 aaPredicted RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 MRPL43Q8N983 215 aaKnown RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 KRI1Q8N9T8 703 aaKnown RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 AMNQ9BXJ7 453 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 BRINP2Q9C0B6 783 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 C1orf112Q9NSG2 853 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 RBM28Q9NW13 759 aaKnown RBP8.79□□□□□ -1
NPIPB4-215ENST00000542133 PLA2G2EQ9NZK7 142 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 IGSF9Q9P2J2 1179 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 CA14Q9ULX7 337 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 VPS9D1Q9Y2B5 631 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 KDM3AQ9Y4C1 1321 aa8.79□□□□□ -1
NPIPB4-215ENST00000542133 ZZEF1O43149 2961 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 C9IYK1 514 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 CBFA2T2O43439 604 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 STAM2O75886 525 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 EPCAMP16422 314 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 ZNF16P17020 682 aaPredicted RBP8.78□□□□□ -1
NPIPB4-215ENST00000542133 TGM1P22735 817 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 DMWDQ09019 674 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 PPM1JQ5JR12 505 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 PHLDB3Q6NSJ2 640 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 TMC5Q6UXY8 1006 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 LRRC55Q6ZSA7 311 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 LRRC43Q8N309 656 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 SAMD3Q8N6K7 520 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 PNMA1Q8ND90 353 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 ATL2Q8NHH9 583 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 ZDHHC16Q969W1 377 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 ZNF558Q96NG5 402 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 CELF4Q9BZC1 486 aaKnown RBP8.78□□□□□ -1
NPIPB4-215ENST00000542133 VAT1LQ9HCJ6 419 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 SH2B1Q9NRF2 756 aaPredicted RBP8.78□□□□□ -1
NPIPB4-215ENST00000542133 RGS18Q9NS28 235 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 ZBTB40Q9NUA8 1239 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 GEMIN8Q9NWZ8 242 aaKnown RBP8.78□□□□□ -1
NPIPB4-215ENST00000542133 ERAP1Q9NZ08 941 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 SMG5Q9UPR3 1016 aaKnown RBP8.78□□□□□ -1
NPIPB4-215ENST00000542133 PCDHA1Q9Y5I3 950 aa8.78□□□□□ -1
NPIPB4-215ENST00000542133 DENND3A2RUS2 1198 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 GOLGA8CPA6NN73 597 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 GCOM1H8Y6P7 765 aaPredicted RBP8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 POLR2MP0CAP2 368 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 GLULP15104 373 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 KRT17Q04695 432 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 NFX1Q12986 1120 aaKnown RBP8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 COL9A3Q14050 684 aaPredicted RBP8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 ALX1Q15699 326 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 ZNF528Q3MIS6 628 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 EGFLAMQ63HQ2 1017 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 SLC24A5Q71RS6 500 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 GPR149Q86SP6 731 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 FCHSD1Q86WN1 690 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 DGKHQ86XP1 1220 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 TBC1D10CQ8IV04 446 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 SLC39A11Q8N1S5 342 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 RSAD2Q8WXG1 361 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 ADAM2Q99965 735 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 ZKSCAN3Q9BRR0 538 aa8.77□□□□□ -1.01
NPIPB4-215ENST00000542133 TMEM117Q9H0C3 514 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms