RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 RNF19AQ9NV58 838 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 DACT1Q9NYF0 836 aa23.57■■□□□ 1.36
PTMS-205ENST00000540828 BRWD1Q9NSI6 2320 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.56■■□□□ 1.36
PTMS-205ENST00000540828 POTEMA6NI47 508 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 ASAP2O43150 1006 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 OR52Z1P0C646 297 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 FGFR1P11362 822 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 SFPQP23246 707 aaKnown RBP eCLIP23.56■■□□□ 1.36
PTMS-205ENST00000540828 EMC2Q15006 297 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 TMEM117Q9H0C3 514 aa23.56■■□□□ 1.36
PTMS-205ENST00000540828 FNDC1Q4ZHG4 1894 aaPredicted RBP23.56■■□□□ 1.36
PTMS-205ENST00000540828 HOXA2O43364 376 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 EOMESO95936 686 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 SPATA31C1P0DKV0 1188 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 TECP42680 631 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 LAMTOR4Q0VGL1 99 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 TCEAL5Q5H9L2 206 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 ZNF598Q86UK7 904 aaKnown RBP23.55■■□□□ 1.36
PTMS-205ENST00000540828 C4orf32Q8N8J7 132 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 KLHL23Q8NBE8 558 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 SPPL3Q8TCT6 385 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 CASD1Q96PB1 797 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 TRAIPQ9BWF2 469 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 NSUN3Q9H649 340 aaKnown RBP23.55■■□□□ 1.36
PTMS-205ENST00000540828 TUFT1Q9NNX1 390 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 ALG13Q9NP73 1137 aaKnown RBP23.55■■□□□ 1.36
PTMS-205ENST00000540828 XPNPEP1Q9NQW7 623 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 TYW1Q9NV66 732 aaKnown RBP23.55■■□□□ 1.36
PTMS-205ENST00000540828 NOL7Q9UMY1 257 aaKnown RBP23.55■■□□□ 1.36
PTMS-205ENST00000540828 KIF3AQ9Y496 699 aa23.55■■□□□ 1.36
PTMS-205ENST00000540828 ITGB1P05556 798 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 SRGAP2CP0DJJ0 459 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 TOB1P50616 345 aaPredicted RBP23.54■■□□□ 1.36
PTMS-205ENST00000540828 KCNQ1P51787 676 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 CAMK1Q14012 370 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 SRGAP1Q7Z6B7 1085 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 FERMT3Q86UX7 667 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 MTRQ99707 1265 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 POLR3CQ9BUI4 534 aaPredicted RBP23.54■■□□□ 1.36
PTMS-205ENST00000540828 CWH43Q9H720 699 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 AAASQ9NRG9 546 aa23.54■■□□□ 1.36
PTMS-205ENST00000540828 BMP2KQ9NSY1 1161 aaPredicted RBP23.54■■□□□ 1.36
PTMS-205ENST00000540828 RARRES1P49788 294 aa23.53■■□□□ 1.36
PTMS-205ENST00000540828 CATSPER4Q7RTX7 472 aa23.53■■□□□ 1.36
PTMS-205ENST00000540828 CATSPER3Q86XQ3 398 aa23.53■■□□□ 1.36
PTMS-205ENST00000540828 ADAMTS19Q8TE59 1207 aa23.53■■□□□ 1.36
PTMS-205ENST00000540828 PIGOQ8TEQ8 1089 aa23.53■■□□□ 1.36
PTMS-205ENST00000540828 UBE2ZQ9H832 354 aaPredicted RBP23.53■■□□□ 1.36
PTMS-205ENST00000540828 PCDHB12Q9Y5F1 795 aa23.53■■□□□ 1.36
PTMS-205ENST00000540828 A0A087WWV3 80 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 MED24O75448 989 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 DGAT1O75907 488 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 ATF7P17544 494 aaPredicted RBP23.52■■□□□ 1.36
PTMS-205ENST00000540828 DNAJB1P25685 340 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 COL19A1Q14993 1142 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 SPOUT1Q5T280 376 aaKnown RBP23.52■■□□□ 1.36
PTMS-205ENST00000540828 LRRC55Q6ZSA7 311 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 MINDY3Q9H8M7 445 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 VCANP13611 3396 aa23.52■■□□□ 1.36
PTMS-205ENST00000540828 SKIP12755 728 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 RPA1P27694 616 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 ARL2P36404 184 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 PHKA2P46019 1235 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 MXD4Q14582 209 aaPredicted RBP23.51■■□□□ 1.35
PTMS-205ENST00000540828 NBR1Q14596 966 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 CLLU1OSQ5K130 101 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 RNF149Q8NC42 400 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 RNF169Q8NCN4 708 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 NACC1Q96RE7 527 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 HCSTQ9UBK5 93 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 PIN4Q9Y237 131 aaKnown RBP23.51■■□□□ 1.35
PTMS-205ENST00000540828 KIAA1671Q9BY89 1806 aa23.51■■□□□ 1.35
PTMS-205ENST00000540828 NCOR1O75376 2440 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 NCK2O43639 380 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 ZNF623O75123 536 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 LAG3P18627 525 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 GJB2P29033 226 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 FXR2P51116 673 aaKnown RBP eCLIP23.5■■□□□ 1.351e-7■■□□□ 13.8
PTMS-205ENST00000540828 POU5F1BQ06416 359 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 CSPP1Q1MSJ5 1256 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 TWF2Q6IBS0 349 aaKnown RBP23.5■■□□□ 1.35
PTMS-205ENST00000540828 ABI1Q8IZP0 508 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 COLGALT1Q8NBJ5 622 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 ERMNQ8TAM6 284 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 POF1BQ8WVV4 589 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 PABPC5Q96DU9 382 aaKnown RBP23.5■■□□□ 1.35
PTMS-205ENST00000540828 AGPAT5Q9NUQ2 364 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 DBR1Q9UK59 544 aaKnown RBP23.5■■□□□ 1.35
PTMS-205ENST00000540828 PCDHB6Q9Y5E3 794 aa23.5■■□□□ 1.35
PTMS-205ENST00000540828 TCF20Q9UGU0 1960 aaKnown RBP23.49■■□□□ 1.35
PTMS-205ENST00000540828 SPTBN5Q9NRC6 3674 aaKnown RBP23.49■■□□□ 1.35
PTMS-205ENST00000540828 HOXA11P31270 313 aaPredicted RBP23.49■■□□□ 1.35
PTMS-205ENST00000540828 PTENP60484 403 aa23.49■■□□□ 1.35
PTMS-205ENST00000540828 UBE3AQ05086 875 aa23.49■■□□□ 1.35
PTMS-205ENST00000540828 PTGDRQ13258 359 aa23.49■■□□□ 1.35
PTMS-205ENST00000540828 PDIA5Q14554 519 aa23.49■■□□□ 1.35
PTMS-205ENST00000540828 LEXMQ3ZCV2 418 aa23.49■■□□□ 1.35
PTMS-205ENST00000540828 IFNLR1Q8IU57 520 aaPredicted RBP23.49■■□□□ 1.35
PTMS-205ENST00000540828 CCDC43Q96MW1 224 aaKnown RBP23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms