RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 RHOXF2BP0C7M4 288 aa15.03■□□□□ -0
RTN3-210ENST00000540798 CYP2J2P51589 502 aa15.03■□□□□ -0
RTN3-210ENST00000540798 SLC17A8Q8NDX2 589 aa15.03■□□□□ -0
RTN3-210ENST00000540798 RHOXF2Q9BQY4 288 aa15.03■□□□□ -0
RTN3-210ENST00000540798 GPR88Q9GZN0 384 aa15.03■□□□□ -0
RTN3-210ENST00000540798 TSKSQ9UJT2 592 aa15.03■□□□□ -0
RTN3-210ENST00000540798 KLRC1P26715 233 aa15.03■□□□□ -0
RTN3-210ENST00000540798 ARID5AQ03989 594 aa15.03■□□□□ -0
RTN3-210ENST00000540798 ANKRD13CQ8N6S4 541 aa15.03■□□□□ -0
RTN3-210ENST00000540798 LMO3Q8TAP4 145 aa15.03■□□□□ -0
RTN3-210ENST00000540798 CAPZA3Q96KX2 299 aa15.03■□□□□ -0
RTN3-210ENST00000540798 CYP39A1Q9NYL5 469 aa15.03■□□□□ -0
RTN3-210ENST00000540798 TESPA1A2RU30 521 aaPredicted RBP15.03■□□□□ -0
RTN3-210ENST00000540798 STAM2O75886 525 aa15.03■□□□□ -0
RTN3-210ENST00000540798 GFPT2O94808 682 aa15.03■□□□□ -0
RTN3-210ENST00000540798 BRD2P25440 801 aaKnown RBP15.03■□□□□ -0
RTN3-210ENST00000540798 GABPB1Q06547 395 aaPredicted RBP15.03■□□□□ -0
RTN3-210ENST00000540798 GJB7Q6PEY0 223 aa15.03■□□□□ -0
RTN3-210ENST00000540798 NLRX1Q86UT6 975 aa15.03■□□□□ -0
RTN3-210ENST00000540798 MMGT1Q8N4V1 131 aa15.03■□□□□ -0
RTN3-210ENST00000540798 NSUN6Q8TEA1 469 aaKnown RBP15.03■□□□□ -0
RTN3-210ENST00000540798 COG1Q8WTW3 980 aa15.03■□□□□ -0
RTN3-210ENST00000540798 SYT11Q9BT88 431 aa15.03■□□□□ -0
RTN3-210ENST00000540798 TEX13BQ9BXU2 312 aa15.03■□□□□ -0
RTN3-210ENST00000540798 PACSIN1Q9BY11 444 aa15.03■□□□□ -0
RTN3-210ENST00000540798 STK33Q9BYT3 514 aa15.03■□□□□ -0
RTN3-210ENST00000540798 NAGPAQ9UK23 515 aa15.03■□□□□ -0
RTN3-210ENST00000540798 L1RE1Q9UN81 338 aa15.03■□□□□ -0
RTN3-210ENST00000540798 FERP16591 822 aa15.02■□□□□ -0
RTN3-210ENST00000540798 ANO5Q75V66 913 aa15.02■□□□□ -0
RTN3-210ENST00000540798 SYCP3Q8IZU3 236 aa15.02■□□□□ -0
RTN3-210ENST00000540798 USP20Q9Y2K6 914 aa15.02■□□□□ -0
RTN3-210ENST00000540798 PCDHA10Q9Y5I2 948 aa15.02■□□□□ -0
RTN3-210ENST00000540798 TMEM150BA6NC51 233 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 SPDYE16A6NNV3 312 aaPredicted RBP15.02□□□□□ -0.01
RTN3-210ENST00000540798 F8VZ95 297 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 ERLIN1O75477 346 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 HAUS6Q7Z4H7 955 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 SLC30A5Q8TAD4 765 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02□□□□□ -0.01
RTN3-210ENST00000540798 INTS2Q9H0H0 1204 aaKnown RBP15.02□□□□□ -0.01
RTN3-210ENST00000540798 LRRC37A2A6NM11 1700 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 SIP14410 1827 aa15.02□□□□□ -0.01
RTN3-210ENST00000540798 PMM2O15305 246 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 BUB1O43683 1085 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 EXOC3O60645 756 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 RFX1P22670 979 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 KIAA0753Q2KHM9 967 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 NFRKBQ6P4R8 1299 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 INTS8Q75QN2 995 aaKnown RBP15.01□□□□□ -0.01
RTN3-210ENST00000540798 HVCN1Q96D96 273 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 ACAD9Q9H845 621 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 ABCB6Q9NP58 842 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 A1CFQ9NQ94 594 aaKnown RBP15.01□□□□□ -0.01
RTN3-210ENST00000540798 P4HA2O15460 535 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 USP2O75604 605 aaPredicted RBP15.01□□□□□ -0.01
RTN3-210ENST00000540798 SOX5P35711 763 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 STAT1P42224 750 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 C1orf220Q5T0J3 134 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 MEI1Q5TIA1 1274 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 MAEAQ7L5Y9 396 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 IWS1Q96ST2 819 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 PDLIM7Q9NR12 457 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 HOXC10Q9NYD6 342 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 INTUQ9ULD6 942 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 PALMO75781 387 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 TRIM49P0CI25 452 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 TRIM49CP0CI26 452 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 MYL7Q01449 175 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 SUPT20HL1Q3ZLR7 823 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 NTPCRQ9BSD7 190 aaKnown RBP15.01□□□□□ -0.01
RTN3-210ENST00000540798 TMOD4Q9NZQ9 345 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 APEX2Q9UBZ4 518 aa15.01□□□□□ -0.01
RTN3-210ENST00000540798 SPATA31C2B4DYI2 1134 aa15□□□□□ -0.01
RTN3-210ENST00000540798 TISP43B9A030 160 aa15□□□□□ -0.01
RTN3-210ENST00000540798 NCK2O43639 380 aa15□□□□□ -0.01
RTN3-210ENST00000540798 ZNF862O60290 1169 aa15□□□□□ -0.01
RTN3-210ENST00000540798 PLA2G4FQ68DD2 849 aa15□□□□□ -0.01
RTN3-210ENST00000540798 RUBCNQ92622 972 aa15□□□□□ -0.01
RTN3-210ENST00000540798 GPRC5CQ9NQ84 441 aa15□□□□□ -0.01
RTN3-210ENST00000540798 SNCAIPQ9Y6H5 919 aa15□□□□□ -0.01
RTN3-210ENST00000540798 GRID2IPA4D2P6 1211 aa15□□□□□ -0.01
RTN3-210ENST00000540798 DDX3XO00571 662 aaKnown RBP eCLIP15□□□□□ -0.016e-22■■■□□ 17.7
RTN3-210ENST00000540798 LMNB1P20700 586 aa15□□□□□ -0.01
RTN3-210ENST00000540798 MCM3P25205 808 aa15□□□□□ -0.01
RTN3-210ENST00000540798 NPEPPSP55786 919 aa15□□□□□ -0.01
RTN3-210ENST00000540798 XKR9Q5GH70 373 aa15□□□□□ -0.01
RTN3-210ENST00000540798 FMNL3Q8IVF7 1028 aa15□□□□□ -0.01
RTN3-210ENST00000540798 TMEM161BQ8NDZ6 487 aa15□□□□□ -0.01
RTN3-210ENST00000540798 CAGE1Q8TC20 777 aa15□□□□□ -0.01
RTN3-210ENST00000540798 SPIRE2Q8WWL2 714 aa15□□□□□ -0.01
RTN3-210ENST00000540798 CDHR1Q96JP9 859 aa15□□□□□ -0.01
RTN3-210ENST00000540798 CBWD1Q9BRT8 395 aa15□□□□□ -0.01
RTN3-210ENST00000540798 HSPBP1Q9NZL4 362 aa15□□□□□ -0.01
RTN3-210ENST00000540798 RNF14Q9UBS8 474 aa15□□□□□ -0.01
RTN3-210ENST00000540798 TCEAL9Q9UHQ7 104 aa15□□□□□ -0.01
RTN3-210ENST00000540798 DNAJC12Q9UKB3 198 aa15□□□□□ -0.01
RTN3-210ENST00000540798 A0A0A6YYK5 440 aaPredicted RBP14.99□□□□□ -0.01
RTN3-210ENST00000540798 EVI5O60447 810 aa14.99□□□□□ -0.01
RTN3-210ENST00000540798 DLG4P78352 724 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms