RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CCDC91Q7Z6B0 441 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 MYCT1Q8N699 235 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 CENPTQ96BT3 561 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 HSD17B14Q9BPX1 270 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 ATP8A1Q9Y2Q0 1164 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 GOLGA6L10A0A0M3HER8 536 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 FAM187AA6NFU0 413 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 NPR1P16066 1061 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 NMT1P30419 496 aaKnown RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 DRG2P55039 364 aaKnown RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 SH3BP5LQ7L8J4 393 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 CYP2W1Q8TAV3 490 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 ZDHHC15Q96MV8 337 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 TRIM31Q9BZY9 425 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 IKZF4Q9H2S9 585 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 TUFT1Q9NNX1 390 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 ZDHHC18Q9NUE0 388 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 FAM198AQ9UFP1 575 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 DAAM1Q9Y4D1 1078 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 FRMPD4Q14CM0 1322 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 IGSF9BQ9UPX0 1349 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 F5H6K3 240 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 TAL1P17542 331 aaPredicted RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 ABCB4P21439 1286 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 TNFAIP3P21580 790 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 ZNF76P36508 570 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 CDR1P51861 262 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 PPARDQ03181 441 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 KLRC3Q07444 240 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 PRPF4BQ13523 1007 aaKnown RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 USH1GQ495M9 461 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 ZC2HC1CQ53FD0 456 aaPredicted RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 PIGOQ8TEQ8 1089 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 TATDN2Q93075 761 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 OSBPL7Q9BZF2 842 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 KLC4Q9NSK0 619 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 DMAC2Q9NW81 257 aa13.32□□□□□ -0.28
NPC1-202ENST00000540608 RGS17Q9UGC6 210 aaPredicted RBP13.32□□□□□ -0.28
NPC1-202ENST00000540608 ANKRD62A6NC57 917 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 SLITRK3O94933 977 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 NUDT17P0C025 328 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 DHX34Q14147 1143 aaKnown RBP13.31□□□□□ -0.28
NPC1-202ENST00000540608 PPP2R5AQ15172 486 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 CBWD6Q4V339 395 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 CBWD3Q5JTY5 395 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 CBWD5Q5RIA9 395 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 KRT27Q7Z3Y8 459 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 HOOK3Q86VS8 718 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 CACNA2D3Q8IZS8 1091 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 ARHGEF26Q96DR7 871 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 INTS2Q9H0H0 1204 aaKnown RBP13.31□□□□□ -0.28
NPC1-202ENST00000540608 PARVGQ9HBI0 331 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 LRRC4CQ9HCJ2 640 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 GOLGA6L7A0A1B0GV03 622 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 BYSLQ13895 437 aaKnown RBP13.31□□□□□ -0.28
NPC1-202ENST00000540608 CTTNQ14247 550 aaKnown RBP13.31□□□□□ -0.28
NPC1-202ENST00000540608 GKAP1Q5VSY0 366 aaPredicted RBP13.31□□□□□ -0.28
NPC1-202ENST00000540608 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 OTOP1Q7RTM1 612 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 ZNF720Q7Z2F6 126 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 GMCL1P1Q8NEA9 526 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 GMCL1Q96IK5 515 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 CCDC114Q96M63 670 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 THAP2Q9H0W7 228 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 EPB41L4BQ9H329 900 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 PI4KBQ9UBF8 816 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 APEX2Q9UBZ4 518 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 FRMD4BQ9Y2L6 1034 aa13.31□□□□□ -0.28
NPC1-202ENST00000540608 UBE4BO95155 1302 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 OPLAHO14841 1288 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 CAND2O75155 1236 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 GDF11O95390 407 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 DRD4P21917 467 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 PMS2P54278 862 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 HADHBP55084 474 aaKnown RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 COG2Q14746 738 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 LACTB2Q53H82 288 aaPredicted RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 ERMARDQ5T6L9 678 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 HS2ST1Q7LGA3 356 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 CPLX4Q7Z7G2 160 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 P3H4Q92791 437 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 NCAPGQ9BPX3 1015 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 ERVK-5Q9HDB9 667 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 SLC40A1Q9NP59 571 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.3□□□□□ -0.28
NPC1-202ENST00000540608 GEMIN8Q9NWZ8 242 aaKnown RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 SEL1LQ9UBV2 794 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 IGLV3-22A0A075B6J6 115 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 PIK3CDO00329 1044 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 DNM1LO00429 736 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 RXRBP28702 533 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 HOXA13P31271 388 aaPredicted RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 RBM5P52756 815 aaKnown RBP eCLIP13.3□□□□□ -0.28
NPC1-202ENST00000540608 GSCP56915 257 aaPredicted RBP13.3□□□□□ -0.28
NPC1-202ENST00000540608 ICA1Q05084 483 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 KIF22Q14807 665 aa13.3□□□□□ -0.28
NPC1-202ENST00000540608 ANKRD20A8PQ5CZ79 823 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms