RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 GTF2F1P35269 517 aaKnown RBP eCLIP14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 SMAD2Q15796 467 aaKnown RBP14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 CLLU1OSQ5K130 101 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 GJD3Q8N144 294 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 ZNF579Q8NAF0 562 aaKnown RBP14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 PPP2R3CQ969Q6 453 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 MTMR9Q96QG7 549 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 HSD17B14Q9BPX1 270 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 SH2D3AQ9BRG2 576 aa14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 FDXACB1Q9BRP7 624 aaPredicted RBP14.69□□□□□ -0.06
SEMA4D-223ENST00000540475 BTBD18B2RXH4 712 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 LINC01565O15544 149 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 MBTPS2O43462 519 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 GAS2O43903 313 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 LYPLA2O95372 231 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 BAG4O95429 457 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 RFC5P40937 340 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 NPEPPSP55786 919 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 ERVFC1P60507 584 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 KCNC3Q14003 757 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 PLA2G4FQ68DD2 849 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 TMEM184AQ6ZMB5 413 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 ADGRD2Q7Z7M1 963 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 RHPN2Q8IUC4 686 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 ZNF668Q96K58 619 aaPredicted RBP14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 LXNQ9BS40 222 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 ZSWIM4Q9H7M6 989 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 BRMS1Q9HCU9 246 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 CLEC1BQ9P126 229 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 HCSTQ9UBK5 93 aa14.68□□□□□ -0.06
SEMA4D-223ENST00000540475 FSD2A1L4K1 749 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 JAK2O60674 1132 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 GPR37L1O60883 481 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 CSDE1O75534 798 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 SKIP12755 728 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 FGFR4P22455 802 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 SFPQP23246 707 aaKnown RBP eCLIP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 YWHABP31946 246 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 PHKA2P46019 1235 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 ZP2Q05996 745 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 COASYQ13057 564 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 SMAD4Q13485 552 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 KCNT2Q6UVM3 1135 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 OTUD6AQ7L8S5 288 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 KSR1Q8IVT5 923 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 ADHFE1Q8IWW8 467 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 DIS3L2Q8IYB7 885 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 LRRC43Q8N309 656 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 SLC7A3Q8WY07 619 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 MRPS27Q92552 414 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 CEP170P1Q96L14 293 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 CDCA3Q99618 268 aaPredicted RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 KIF2CQ99661 725 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 LLPHQ9BRT6 129 aaKnown RBP14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 TLR9Q9NR96 1032 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 RGL1Q9NZL6 768 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 PCDHA12Q9UN75 941 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 LIMCH1Q9UPQ0 1083 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 COL4A3BPQ9Y5P4 624 aa14.67□□□□□ -0.06
SEMA4D-223ENST00000540475 WNT7AO00755 349 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 ASAP2O43150 1006 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 GLP2RO95838 553 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 COL9A1P20849 921 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 PPM1AP35813 382 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 POU5F1BQ06416 359 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 DUSP6Q16828 381 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 SPOUT1Q5T280 376 aaKnown RBP14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 SRGAP1Q7Z6B7 1085 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 TCP11Q8WWU5 503 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 PRPF31Q8WWY3 499 aaKnown RBP14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 DYDC2Q96IM9 177 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 IGFLR1Q9H665 355 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 C11orf16Q9NQ32 467 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 AGPAT5Q9NUQ2 364 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 CD207Q9UJ71 328 aa14.66□□□□□ -0.06
SEMA4D-223ENST00000540475 ZBTB39O15060 712 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 XRCC6P12956 609 aaKnown RBP eCLIP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 HOXA11P31270 313 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 NRIP1P48552 1158 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 LAMTOR4Q0VGL1 99 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 PCBP1Q15365 356 aaKnown RBP eCLIP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 CALCRLQ16602 461 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 NCAPH2Q6IBW4 605 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 MRPL10Q7Z7H8 261 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 FERMT3Q86UX7 667 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 IFNLR1Q8IU57 520 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 THNSL1Q8IYQ7 743 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 ABI1Q8IZP0 508 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 SLC39A11Q8N1S5 342 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 SMRP1Q8NCR6 262 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 PSPC1Q8WXF1 523 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 ZNF558Q96NG5 402 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 SCLT1Q96NL6 688 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 EIF2AK1Q9BQI3 630 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 MRPL9Q9BYD2 267 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 TLE6Q9H808 572 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 TTC12Q9H892 705 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 NGRNQ9NPE2 291 aaKnown RBP14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 ANKEF1Q9NU02 776 aa14.65□□□□□ -0.06
SEMA4D-223ENST00000540475 FAM105AQ9NUU6 356 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 525.5 ms