RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 NTPCRQ9BSD7 190 aaKnown RBP18.54■□□□□ 0.56
COPS3-212ENST00000539941 NUP58Q9BVL2 599 aa18.54■□□□□ 0.56
COPS3-212ENST00000539941 TMX1Q9H3N1 280 aa18.54■□□□□ 0.56
COPS3-212ENST00000539941 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
COPS3-212ENST00000539941 METTL14Q9HCE5 456 aaKnown RBP18.54■□□□□ 0.56
COPS3-212ENST00000539941 GPRC5CQ9NQ84 441 aa18.54■□□□□ 0.56
COPS3-212ENST00000539941 H0YCG3 227 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 TRPA1O75762 1119 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 GH1P01241 217 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 TM4SF4P48230 202 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 POLGP54098 1239 aaPredicted RBP18.53■□□□□ 0.56
COPS3-212ENST00000539941 PEX3P56589 373 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 KCNA1Q09470 495 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 EMC2Q15006 297 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 HAUS6Q7Z4H7 955 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 PANX2Q96RD6 677 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 TINF2Q9BSI4 451 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 MKNK1Q9BUB5 465 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 ABHD16BQ9H3Z7 469 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 DHX33Q9H6R0 707 aaKnown RBP18.53■□□□□ 0.56
COPS3-212ENST00000539941 XPNPEP1Q9NQW7 623 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 PDGFCQ9NRA1 345 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 SAGE1Q9NXZ1 904 aa18.53■□□□□ 0.56
COPS3-212ENST00000539941 SNAI1O95863 264 aaPredicted RBP18.52■□□□□ 0.56
COPS3-212ENST00000539941 GYPCP04921 128 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 HOXC6P09630 235 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 EPB41P11171 864 aaKnown RBP18.52■□□□□ 0.56
COPS3-212ENST00000539941 RBL2Q08999 1139 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 MAP2K5Q13163 448 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 TARBP2Q15633 366 aaKnown RBP18.52■□□□□ 0.56
COPS3-212ENST00000539941 SLC9A9Q8IVB4 645 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 EXOC8Q8IYI6 725 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 SYCP3Q8IZU3 236 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 KCNN1Q92952 543 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 EXOC7Q9UPT5 735 aa18.52■□□□□ 0.56
COPS3-212ENST00000539941 MFAP3LO75121 409 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 CAPN15O75808 1086 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 NPTX2P47972 431 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 ARHGAP1Q07960 439 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 FIGNQ5HY92 759 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 ZNF771Q7L3S4 317 aaPredicted RBP18.51■□□□□ 0.55
COPS3-212ENST00000539941 C12orf56Q8IXR9 622 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 ATP8B4Q8TF62 1192 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 SLC7A3Q8WY07 619 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 GLG1Q92896 1179 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 IFT74Q96LB3 600 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 CEP89Q96ST8 783 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 SMARCAD1Q9H4L7 1026 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 AGPAT3Q9NRZ7 376 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 DMAC2Q9NW81 257 aa18.51■□□□□ 0.55
COPS3-212ENST00000539941 ARMCX3Q9UH62 379 aaPredicted RBP18.51■□□□□ 0.55
COPS3-212ENST00000539941 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.51■□□□□ 0.55
COPS3-212ENST00000539941 NKRFO15226 690 aaKnown RBP eCLIP18.5■□□□□ 0.55
COPS3-212ENST00000539941 CTIFO43310 598 aaKnown RBP18.5■□□□□ 0.55
COPS3-212ENST00000539941 STX10O60499 249 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 CEP135Q66GS9 1140 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 TMEM161BQ8NDZ6 487 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 NAA15Q9BXJ9 866 aaKnown RBP18.5■□□□□ 0.55
COPS3-212ENST00000539941 POLR3FQ9H1D9 316 aaPredicted RBP18.5■□□□□ 0.55
COPS3-212ENST00000539941 KMT5AQ9NQR1 393 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 KCND1Q9NSA2 647 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 GAS2O43903 313 aaKnown RBP18.5■□□□□ 0.55
COPS3-212ENST00000539941 CASP14P31944 242 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 ADKP55263 362 aaKnown RBP18.5■□□□□ 0.55
COPS3-212ENST00000539941 PPP2R5AQ15172 486 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 PPTC7Q8NI37 304 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 NPLOC4Q8TAT6 608 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 SOCS4Q8WXH5 440 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 COPS5Q92905 334 aa18.5■□□□□ 0.55
COPS3-212ENST00000539941 BAG1Q99933 345 aaPredicted RBP18.5■□□□□ 0.55
COPS3-212ENST00000539941 CCDC169A6NNP5 214 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 CLIC2O15247 247 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 SLC16A4O15374 487 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 ARHGAP6O43182 974 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 AKAP3O75969 853 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 ALDH1A1P00352 501 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 PSMC2P35998 433 aaKnown RBP18.49■□□□□ 0.55
COPS3-212ENST00000539941 ACVR2BQ13705 512 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 IQSEC1Q6DN90 963 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 MAP4K3Q8IVH8 894 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 BSNDQ8WZ55 320 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 USP6NLQ92738 828 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 CAPN11Q9UMQ6 739 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 CASP8AP2Q9UKL3 1982 aa18.49■□□□□ 0.55
COPS3-212ENST00000539941 A0A1W2PQJ5 194 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 MAFO75444 373 aaPredicted RBP18.48■□□□□ 0.55
COPS3-212ENST00000539941 FECHP22830 423 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 ARL2P36404 184 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 FXR1P51114 621 aaKnown RBP eCLIP18.48■□□□□ 0.55
COPS3-212ENST00000539941 DUSP28Q4G0W2 176 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 TMEM139Q8IV31 216 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 KSR1Q8IVT5 923 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 JPH2Q9BR39 696 aaPredicted RBP18.48■□□□□ 0.55
COPS3-212ENST00000539941 TTYH3Q9C0H2 523 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 TBX20Q9UMR3 447 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 SIK3Q9Y2K2 1263 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 FRMD4BQ9Y2L6 1034 aa18.48■□□□□ 0.55
COPS3-212ENST00000539941 HBP1O60381 514 aa18.47■□□□□ 0.55
COPS3-212ENST00000539941 XRCC5P13010 732 aaKnown RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms