RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 CACNB2Q08289 660 aaPredicted RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 RAD51AP2Q09MP3 1159 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 ADAM9Q13443 819 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 GRIK4Q16099 956 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 TSR1Q2NL82 804 aaKnown RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 SLC9C1Q4G0N8 1177 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 MAP3K21Q5TCX8 1036 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 FRMD5Q7Z6J6 570 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 GAS2L3Q86XJ1 694 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 MAP4K3Q8IVH8 894 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 METTL13Q8N6R0 699 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 KIAA0895Q8NCT3 520 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 GLT1D1Q96MS3 346 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 PRMT7Q9NVM4 692 aaPredicted RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 RNF216Q9NWF9 866 aaPredicted RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 WBP1LQ9NX94 342 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 SUCLA2Q9P2R7 463 aaPredicted RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 WRAP73Q9P2S5 460 aaPredicted RBP12.94□□□□□ -0.34
VTN-202ENST00000539746 GDAQ9Y2T3 454 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 PCDHA2Q9Y5H9 948 aa12.94□□□□□ -0.34
VTN-202ENST00000539746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.94□□□□□ -0.34
VTN-202ENST00000539746 MROH7Q68CQ1 1323 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 SMIM35A0A1B0GVV1 85 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 LRRC10BA6NIK2 292 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 LRRIQ4A6NIV6 560 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 KCNJ18B7U540 433 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 INSRRP14616 1297 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 BMP6P22004 513 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 GARTP22102 1010 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 NR2F2P24468 414 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 MARK3P27448 753 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 PSEN2P49810 448 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 LIG4P49917 911 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 KCNJ12Q14500 433 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 SURF1Q15526 300 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 CCL14Q16627 93 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 TMEM132AQ24JP5 1023 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 KIAA0753Q2KHM9 967 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 TCP11X2Q5H9J9 407 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 CDKAL1Q5VV42 579 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 EFCAB12Q6NXP0 572 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 TTI2Q6NXR4 508 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 INTS8Q75QN2 995 aaKnown RBP12.93□□□□□ -0.34
VTN-202ENST00000539746 SRGAP1Q7Z6B7 1085 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 SESTD1Q86VW0 696 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 SCFD1Q8WVM8 642 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 VTI1AQ96AJ9 217 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 FAM81BQ96LP2 452 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 PCYT2Q99447 389 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 C16orf70Q9BSU1 422 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 NUP58Q9BVL2 599 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 SRRTQ9BXP5 876 aaKnown RBP12.93□□□□□ -0.34
VTN-202ENST00000539746 MRPL4Q9BYD3 311 aaKnown RBP12.93□□□□□ -0.34
VTN-202ENST00000539746 SUGCTQ9HAC7 445 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 FANCLQ9NW38 375 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 FLRT1Q9NZU1 646 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 ARMCX3Q9UH62 379 aaPredicted RBP12.93□□□□□ -0.34
VTN-202ENST00000539746 LIMA1Q9UHB6 759 aaKnown RBP12.93□□□□□ -0.34
VTN-202ENST00000539746 TBX20Q9UMR3 447 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 MGAMO43451 1857 aa12.93□□□□□ -0.34
VTN-202ENST00000539746 DENND3A2RUS2 1198 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 HNRNPDLO14979 420 aaKnown RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 N4BP3O15049 544 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 STBD1O95210 358 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 SFPQP23246 707 aaKnown RBP eCLIP12.92□□□□□ -0.34
VTN-202ENST00000539746 KLRC1P26715 233 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 CASP1P29466 404 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 AXLP30530 894 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 CTCFP49711 727 aaPredicted RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 AP3M2P53677 418 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 MARSP56192 900 aaKnown RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 PURAQ00577 322 aaKnown RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 FANCCQ00597 558 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 MTHFD1LQ6UB35 978 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 HACE1Q8IYU2 909 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 TMEM161BQ8NDZ6 487 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 ZNF397Q8NF99 534 aaPredicted RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 COPS5Q92905 334 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 ADPGKQ9BRR6 497 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 GCOM2Q9BZD3 368 aaPredicted RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 ARHGAP39Q9C0H5 1083 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 NUCKS1Q9H1E3 243 aaKnown RBP12.92□□□□□ -0.34
VTN-202ENST00000539746 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 ARHGAP28Q9P2N2 729 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 GABRQQ9UN88 632 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 AKT3Q9Y243 479 aa12.92□□□□□ -0.34
VTN-202ENST00000539746 NPHP3-ACAD11A0A0J9YXS1 232 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 PES1O00541 588 aaKnown RBP12.91□□□□□ -0.34
VTN-202ENST00000539746 SORBS3O60504 671 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 EXOC3O60645 756 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 ERLIN2O94905 339 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 C22orf31O95567 290 aa12.91□□□□□ -0.34
VTN-202ENST00000539746 ADCY5O95622 1261 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms