RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 GRIK4Q16099 956 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 L1TD1Q5T7N2 865 aaKnown RBP11.75□□□□□ -0.53
LEMD3-202ENST00000539442 CENPPQ6IPU0 288 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 ZNF720Q7Z2F6 126 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 CTU1Q7Z7A3 348 aaKnown RBP11.75□□□□□ -0.53
LEMD3-202ENST00000539442 RNF180Q86T96 592 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 LUZP1Q86V48 1076 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 SCFD1Q8WVM8 642 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 P2RX5Q93086 422 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 HVCN1Q96D96 273 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 FAM212AQ96EL1 285 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 NTPCRQ9BSD7 190 aaKnown RBP11.75□□□□□ -0.53
LEMD3-202ENST00000539442 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.75□□□□□ -0.53
LEMD3-202ENST00000539442 TBC1D7Q9P0N9 293 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 CTNND2Q9UQB3 1225 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
LEMD3-202ENST00000539442 ASAP2O43150 1006 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 PPP1R37O75864 691 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 CABYRO75952 493 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 SMIM10L2AP0DMW4 78 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 SMIM10L2BP0DMW5 78 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 KLRC1P26715 233 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 TMOD1P28289 359 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 NMT1P30419 496 aaKnown RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 NPTX2P47972 431 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 CTCFP49711 727 aaPredicted RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 DNM2P50570 870 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 PEX3P56589 373 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 LRRC63Q05C16 580 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 MXD4Q14582 209 aaPredicted RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 NCAPHQ15003 741 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 SLC9C1Q4G0N8 1177 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 SPATA1Q5VX52 437 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 CCSAPQ6IQ19 270 aaPredicted RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 LINC01465Q8N7H1 131 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 GLIS3Q8NEA6 775 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 ZNF507Q8TCN5 953 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 PSPC1Q8WXF1 523 aaKnown RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 TSEN34Q9BSV6 310 aaKnown RBP11.74□□□□□ -0.53
LEMD3-202ENST00000539442 STRA6Q9BX79 667 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 FGFBP2Q9BYJ0 223 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 NFE2L3Q9Y4A8 694 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 PHLPP2Q6ZVD8 1323 aa11.74□□□□□ -0.53
LEMD3-202ENST00000539442 MBLAC1A4D2B0 266 aaPredicted RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 MOXD2PA6NHM9 499 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 HSPA1AP0DMV8 641 aaKnown RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 HSPA1BP0DMV9 641 aaKnown RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 MYBP10242 640 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 GNAT1P11488 350 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 GLRA2P23416 452 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 HOXC8P31273 242 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 CASP5P51878 434 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 IGBP1P78318 339 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 ADAM17P78536 824 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 GTF2BQ00403 316 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 LRRC41Q15345 812 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 KCNA10Q16322 511 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 KNOP1Q1ED39 458 aaKnown RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 EFCAB12Q6NXP0 572 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 TTI2Q6NXR4 508 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 FBXO46Q6PJ61 603 aaPredicted RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 HAUS6Q7Z4H7 955 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 TMEM161BQ8NDZ6 487 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 ASAP3Q8TDY4 903 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 NOC3LQ8WTT2 800 aaKnown RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 BSNDQ8WZ55 320 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 MED15Q96RN5 788 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 TSG101Q99816 390 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 KCTD10Q9H3F6 313 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 TMEM206Q9H813 350 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 SUGCTQ9HAC7 445 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 KMT5AQ9NQR1 393 aa11.73□□□□□ -0.53
LEMD3-202ENST00000539442 PAK6Q9NQU5 681 aaPredicted RBP11.73□□□□□ -0.53
LEMD3-202ENST00000539442 C17orf102A2RUQ5 167 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 CCDC169A6NNP5 214 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 PDXKO00764 312 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 ASGR1P07306 291 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 HOXB3P14651 431 aaPredicted RBP11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SOX10P56693 466 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 STX17P56962 302 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SNRPFP62306 86 aaKnown RBP11.72□□□□□ -0.53
LEMD3-202ENST00000539442 POU5F1BQ06416 359 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 TFDP1Q14186 410 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 TPD52L1Q16890 204 aaPredicted RBP11.72□□□□□ -0.53
LEMD3-202ENST00000539442 EDRF1Q3B7T1 1238 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 ZCWPW2Q504Y3 356 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 MARCH8Q5T0T0 291 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 CXCL17Q6UXB2 119 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SESTD1Q86VW0 696 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 ZNF687Q8N1G0 1237 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 C7orf31Q8N865 590 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 ARRDC4Q8NCT1 418 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms