RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 DSC3Q14574 896 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 FAM102BQ5T8I3 360 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 RINT1Q6NUQ1 792 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 C1orf186Q6ZWK4 172 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 ZNF410Q86VK4 478 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 DAW1Q8N136 415 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 TCP11Q8WWU5 503 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 GCOM2Q9BZD3 368 aaPredicted RBP17.5■□□□□ 0.39
RPAIN-206ENST00000539417 CCSER1Q9C0I3 900 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 NKX2-4Q9H2Z4 354 aa17.5■□□□□ 0.39
RPAIN-206ENST00000539417 COL4A6Q14031 1691 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 PPP6R2O75170 966 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 SSBP05455 408 aaKnown RBP eCLIP17.49■□□□□ 0.39
RPAIN-206ENST00000539417 PLA2G4BP0C869 781 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 IBSPP21815 317 aaPredicted RBP17.49■□□□□ 0.39
RPAIN-206ENST00000539417 RAD51AP2Q09MP3 1159 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 MCM6Q14566 821 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 ARSHQ5FYA8 562 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 AXDND1Q5T1B0 1012 aaPredicted RBP17.49■□□□□ 0.39
RPAIN-206ENST00000539417 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 PHOSPHO2Q8TCD6 241 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 ADAM2Q99965 735 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 PANK2Q9BZ23 570 aa17.49■□□□□ 0.39
RPAIN-206ENST00000539417 TTYH1Q9H313 450 aaPredicted RBP17.49■□□□□ 0.39
RPAIN-206ENST00000539417 GPR182O15218 404 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 GJB5O95377 273 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 AMHP03971 560 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 CACNB1Q02641 598 aaPredicted RBP17.48■□□□□ 0.39
RPAIN-206ENST00000539417 MAPK7Q13164 816 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 DHX8Q14562 1220 aaKnown RBP17.48■□□□□ 0.39
RPAIN-206ENST00000539417 NAALADL2Q58DX5 795 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 SHC4Q6S5L8 630 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 CRIPAKQ8N1N5 446 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 SYT2Q8N9I0 419 aaPredicted RBP17.48■□□□□ 0.39
RPAIN-206ENST00000539417 MCPH1Q8NEM0 835 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 CALML4Q96GE6 196 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 CDK5RAP3Q96JB5 506 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 FAM161BQ96MY7 647 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 NT5C3AQ9H0P0 336 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 TSPYL2Q9H2G4 693 aaPredicted RBP17.48■□□□□ 0.39
RPAIN-206ENST00000539417 RCOR1Q9UKL0 485 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 PCDHA7Q9UN72 937 aa17.48■□□□□ 0.39
RPAIN-206ENST00000539417 TCHHQ07283 1943 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 SFI1A8K8P3 1242 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 ASAP2O43150 1006 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 EFCAB14O75071 495 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 PTENP60484 403 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 RAD54LQ92698 747 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 KIFC3Q9BVG8 833 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 RGS18Q9NS28 235 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 USP20Q9Y2K6 914 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 ADGRA3Q8IWK6 1321 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 TTC3P53804 2025 aa17.47■□□□□ 0.39
RPAIN-206ENST00000539417 C9IYK1 514 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 HIP1RO75146 1068 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 EDN1P05305 212 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 CA3P07451 260 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 GATMP50440 423 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 CDC42EP1Q00587 391 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 MBTD1Q05BQ5 628 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 MXD4Q14582 209 aaPredicted RBP17.46■□□□□ 0.39
RPAIN-206ENST00000539417 AMHR2Q16671 573 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 ZNF710Q8N1W2 664 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 TIFAQ96CG3 184 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 FTHL17Q9BXU8 183 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 PCDHA11Q9Y5I1 949 aa17.46■□□□□ 0.39
RPAIN-206ENST00000539417 LRRIQ4A6NIV6 560 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 SLC26A4O43511 780 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 TLL1O43897 1013 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 CUTAO60888 179 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 NCLP19338 710 aaKnown RBP17.45■□□□□ 0.38
RPAIN-206ENST00000539417 ATL3Q6DD88 541 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 CATSPER4Q7RTX7 472 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 SRGAP1Q7Z6B7 1085 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 IFNLR1Q8IU57 520 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-206ENST00000539417 PDILTQ8N807 584 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 RASSF8Q8NHQ8 419 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 LEO1Q8WVC0 666 aaPredicted RBP17.45■□□□□ 0.38
RPAIN-206ENST00000539417 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 GDPD2Q9HCC8 539 aa17.45■□□□□ 0.38
RPAIN-206ENST00000539417 DENND3A2RUS2 1198 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 B4GALT5O43286 388 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 HOXA11P31270 313 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 PHKA2P46019 1235 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 HTRA4P83105 476 aaPredicted RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 RC3H2Q9HBD1 1191 aaKnown RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 CFAP45Q9UL16 551 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 INO80B-WBP1J3KQ70 363 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 TSPAN1O60635 241 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 SFPQP23246 707 aaKnown RBP eCLIP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 GUCY2CP25092 1073 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 ME1P48163 572 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 SARSP49591 514 aaKnown RBP17.44■□□□□ 0.38
RPAIN-206ENST00000539417 FAM189BP81408 668 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 POU5F1BQ06416 359 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 TFDP1Q14186 410 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 RAB30Q15771 203 aa17.44■□□□□ 0.38
RPAIN-206ENST00000539417 RRAGBQ5VZM2 374 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 486 ms