RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 NONOQ15233 471 aaKnown RBP eCLIP14.07□□□□□ -0.16
VAMP1-206ENST00000538970 PLPP4Q5VZY2 271 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 CPLX2Q6PUV4 134 aaKnown RBP14.07□□□□□ -0.16
VAMP1-206ENST00000538970 KCNT2Q6UVM3 1135 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 KRT25Q7Z3Z0 450 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 ABI1Q8IZP0 508 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 RNF169Q8NCN4 708 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 ZNF558Q96NG5 402 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 TCF25Q9BQ70 676 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 SH2D3AQ9BRG2 576 aa14.07□□□□□ -0.16
VAMP1-206ENST00000538970 DDX25Q9UHL0 483 aaKnown RBP14.07□□□□□ -0.16
VAMP1-206ENST00000538970 TECTAO75443 2155 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 LOC730098B7Z3J9 87 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 CSDE1O75534 798 aaKnown RBP14.06□□□□□ -0.16
VAMP1-206ENST00000538970 SCRN1Q12765 414 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 KCNC3Q14003 757 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 CBX2Q14781 532 aaPredicted RBP14.06□□□□□ -0.16
VAMP1-206ENST00000538970 INF2Q27J81 1249 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 HELQQ8TDG4 1101 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 SUSD6Q92537 303 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 PHF20Q9BVI0 1012 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 GCOM2Q9BZD3 368 aaPredicted RBP14.06□□□□□ -0.16
VAMP1-206ENST00000538970 ENTPD7Q9NQZ7 604 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 PDRG1Q9NUG6 133 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 DACT1Q9NYF0 836 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 PUF60Q9UHX1 559 aaKnown RBP14.06□□□□□ -0.16
VAMP1-206ENST00000538970 KCNJ14Q9UNX9 436 aa14.06□□□□□ -0.16
VAMP1-206ENST00000538970 A0A087WZ62 844 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 HIDE1A8MVS5 230 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 MAFO75444 373 aaPredicted RBP14.05□□□□□ -0.16
VAMP1-206ENST00000538970 CDKL5O76039 1030 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 EOMESO95936 686 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 SRGAP2BP0DMP2 458 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 SFPQP23246 707 aaKnown RBP eCLIP14.05□□□□□ -0.16
VAMP1-206ENST00000538970 PSMC5P62195 406 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 CDC42EP1Q00587 391 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 LETM2Q2VYF4 491 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 TMEM184AQ6ZMB5 413 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 ANO5Q75V66 913 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 ZNF410Q86VK4 478 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 SLC39A11Q8N1S5 342 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 EDAQ92838 391 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 FDXACB1Q9BRP7 624 aaPredicted RBP14.05□□□□□ -0.16
VAMP1-206ENST00000538970 TRAIPQ9BWF2 469 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 PHF7Q9BWX1 381 aaPredicted RBP14.05□□□□□ -0.16
VAMP1-206ENST00000538970 MRPL9Q9BYD2 267 aaKnown RBP14.05□□□□□ -0.16
VAMP1-206ENST00000538970 KCNMB3Q9NPA1 279 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 NGRNQ9NPE2 291 aaKnown RBP14.05□□□□□ -0.16
VAMP1-206ENST00000538970 CHST12Q9NRB3 414 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 SPG21Q9NZD8 308 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 VAV3Q9UKW4 847 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 STK36Q9NRP7 1315 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 KMT2EQ8IZD2 1858 aa14.05□□□□□ -0.16
VAMP1-206ENST00000538970 DDX11L8A8MPP1 907 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 EML1O00423 815 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 PHKA2P46019 1235 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 DNM2P50570 870 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 FOXK2Q01167 660 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 KRT17Q04695 432 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 PLA2G4FQ68DD2 849 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 ANKRD54Q6NXT1 300 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 BMP8AQ7Z5Y6 402 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 NEK8Q86SG6 692 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 RHPN2Q8IUC4 686 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 PBXIP1Q96AQ6 731 aa14.04□□□□□ -0.16
VAMP1-206ENST00000538970 SUCLA2Q9P2R7 463 aaPredicted RBP14.04□□□□□ -0.16
VAMP1-206ENST00000538970 DCHS1Q96JQ0 3298 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 CCDC194A0A1B0GVG4 234 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 TMEM221A6NGB7 291 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 M0R296 226 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 GCFC2P16383 781 aaKnown RBP14.03□□□□□ -0.16
VAMP1-206ENST00000538970 TECP42680 631 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 PPP4R3AQ6IN85 833 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 LLGL2Q6P1M3 1020 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 SYCE2Q6PIF2 218 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 TMC7Q7Z402 723 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 KSR1Q8IVT5 923 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 RSPH1Q8WYR4 309 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 NLRP4Q96MN2 994 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 JPH2Q9BR39 696 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-206ENST00000538970 INO80BQ9C086 356 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-206ENST00000538970 S1PR5Q9H228 398 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 CYP26B1Q9NR63 512 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 GJB4Q9NTQ9 266 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 WRAP73Q9P2S5 460 aaPredicted RBP14.03□□□□□ -0.16
VAMP1-206ENST00000538970 TPCN1Q9ULQ1 816 aa14.03□□□□□ -0.16
VAMP1-206ENST00000538970 PIN4Q9Y237 131 aaKnown RBP14.03□□□□□ -0.16
VAMP1-206ENST00000538970 C2orf71A6NGG8 1288 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 PFKFB2O60825 505 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 XBP1P17861 261 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 QARSP47897 775 aaKnown RBP14.02□□□□□ -0.17
VAMP1-206ENST00000538970 BCAR1P56945 870 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 SMC1AQ14683 1233 aaKnown RBP14.02□□□□□ -0.17
VAMP1-206ENST00000538970 TWF2Q6IBS0 349 aaKnown RBP14.02□□□□□ -0.17
VAMP1-206ENST00000538970 TRIM67Q6ZTA4 783 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 OXER1Q8TDS5 423 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 HAS1Q92839 578 aa14.02□□□□□ -0.17
VAMP1-206ENST00000538970 LPPQ93052 612 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms