RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 TTC31Q49AM3 519 aaPredicted RBP9.63□□□□□ -0.87
GGA3-202ENST00000538886 ZNF467Q7Z7K2 595 aaPredicted RBP9.63□□□□□ -0.87
GGA3-202ENST00000538886 GPT2Q8TD30 523 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 SLC5A5Q92911 643 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 KLK14Q9P0G3 267 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 TNNI1P19237 187 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 RPA1P27694 616 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 SPAG1Q07617 926 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 POSTNQ15063 836 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 PPP2R5AQ15172 486 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 FAM26FQ5R3K3 315 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 SFR1Q86XK3 245 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 TCP11Q8WWU5 503 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 YME1L1Q96TA2 773 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 IFIH1Q9BYX4 1025 aaKnown RBP9.63□□□□□ -0.87
GGA3-202ENST00000538886 RCOR1Q9UKL0 485 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 CEP83Q9Y592 693 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 NUB1Q9Y5A7 615 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 IGLV3-22A0A075B6J6 115 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 MAGEB2O15479 319 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 CYP3A4P08684 503 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 IGFBP4P22692 258 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 CMA1P23946 247 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 CASQ1P31415 396 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 ARPP19P56211 112 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 PURAQ00577 322 aaKnown RBP9.63□□□□□ -0.87
GGA3-202ENST00000538886 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 SHC4Q6S5L8 630 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 MAMDC4Q6UXC1 1216 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 GLYCTKQ8IVS8 523 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
GGA3-202ENST00000538886 CPB2Q96IY4 423 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 STK24Q9Y6E0 443 aa9.63□□□□□ -0.87
GGA3-202ENST00000538886 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 CD52P31358 61 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 MTIF2P46199 727 aaKnown RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 CUL4BQ13620 913 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 GDF6Q6KF10 455 aaPredicted RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 KIAA1841Q6NSI8 718 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ARMCX5Q6P1M9 558 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ZNF397Q8NF99 534 aaPredicted RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 KIF18AQ8NI77 898 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 PUF60Q9UHX1 559 aaKnown RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 FBXO2Q9UK22 296 aaPredicted RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 CDY2AQ9Y6F7 541 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 NRCAMQ92823 1304 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ARVCFO00192 962 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 PPP6R2O75170 966 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 SERPINC1P01008 464 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 CIITAP33076 1130 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 CLK2P49760 499 aaKnown RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 MLLT1Q03111 559 aaPredicted RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 MKRN4PQ13434 485 aaPredicted RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 PRPF4BQ13523 1007 aaKnown RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 PDIA5Q14554 519 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ZNF568Q3ZCX4 644 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ZC2HC1CQ53FD0 456 aaPredicted RBP9.62□□□□□ -0.87
GGA3-202ENST00000538886 HACE1Q8IYU2 909 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 TMEM199Q8N511 208 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 RABGGTAQ92696 567 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 RUSC1Q9BVN2 902 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 JRKLQ9Y4A0 524 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 DNM1LO00429 736 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 PSMA7O14818 248 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ZNF862O60290 1169 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 CSF2RAP15509 400 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 GJA8P48165 433 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 LMAN1P49257 510 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 DRP2Q13474 957 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 KCNK18Q7Z418 384 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 CEP57Q86XR8 500 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ETNPPLQ8TBG4 499 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 YY1AP1Q9H869 796 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 ECM29Q5VYK3 1845 aa9.62□□□□□ -0.87
GGA3-202ENST00000538886 MKI67P46013 3256 aaKnown RBP9.61□□□□□ -0.87
GGA3-202ENST00000538886 MYO1CO00159 1063 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 CLDN3O15551 220 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 CLTBP09497 229 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 CCDC172P0C7W6 258 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 ACTN1P12814 892 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 SFPQP23246 707 aaKnown RBP eCLIP9.61□□□□□ -0.87
GGA3-202ENST00000538886 TFAMQ00059 246 aaKnown RBP9.61□□□□□ -0.87
GGA3-202ENST00000538886 GLRA4Q5JXX5 417 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 ABHD15Q6UXT9 468 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 ANO5Q75V66 913 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 REEP2Q9BRK0 252 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 NAT10Q9H0A0 1025 aaKnown RBP9.61□□□□□ -0.87
GGA3-202ENST00000538886 PYCARDQ9ULZ3 195 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 PCDHA5Q9Y5H7 936 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 DDX60LQ5H9U9 1706 aaKnown RBP9.61□□□□□ -0.87
GGA3-202ENST00000538886 EYA4O95677 639 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 CCDC192P0DO97 292 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 PSEN1P49768 467 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 RARRES1P49788 294 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 GJA9P57773 515 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 CCDC62Q6P9F0 684 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 LEKR1Q6ZMV7 388 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 RAD54LQ92698 747 aa9.61□□□□□ -0.87
GGA3-202ENST00000538886 BADQ92934 168 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms