RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 PPP1R16BQ96T49 567 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 ADAM2Q99965 735 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 GCOM2Q9BZD3 368 aaPredicted RBP15.27■□□□□ 0.04
CD9-208ENST00000538834 RAB34Q9BZG1 259 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 ZSCAN16Q9H4T2 348 aaPredicted RBP15.27■□□□□ 0.04
CD9-208ENST00000538834 MINDY3Q9H8M7 445 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 ATP6V0A4Q9HBG4 840 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 CHST12Q9NRB3 414 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 RNF19AQ9NV58 838 aa15.27■□□□□ 0.04
CD9-208ENST00000538834 VPS37CA5D8V6 355 aaPredicted RBP15.26■□□□□ 0.03
CD9-208ENST00000538834 GLRA2P23416 452 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 HOXA11P31270 313 aaPredicted RBP15.26■□□□□ 0.03
CD9-208ENST00000538834 GRIN1Q05586 938 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 GRB10Q13322 594 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 FAM173BQ6P4H8 233 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 HSCBQ8IWL3 235 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 ASAP3Q8TDY4 903 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 LRRC15Q8TF66 581 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 MYLIPQ8WY64 445 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 ZNF668Q96K58 619 aaPredicted RBP15.26■□□□□ 0.03
CD9-208ENST00000538834 AK8Q96MA6 479 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 INO80BQ9C086 356 aaPredicted RBP15.26■□□□□ 0.03
CD9-208ENST00000538834 GINS2Q9Y248 185 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 CLIC4Q9Y696 253 aa15.26■□□□□ 0.03
CD9-208ENST00000538834 UNC80Q8N2C7 3258 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 A0A0U1RQF3 1178 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 C5orf67F2Z3F1 127 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 ZNF623O75123 536 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 CSDE1O75534 798 aaKnown RBP15.25■□□□□ 0.03
CD9-208ENST00000538834 EYA4O95677 639 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 ATF7P17544 494 aaPredicted RBP15.25■□□□□ 0.03
CD9-208ENST00000538834 CCT6AP40227 531 aaKnown RBP15.25■□□□□ 0.03
CD9-208ENST00000538834 CAPSQ13938 189 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 PCBP1Q15365 356 aaKnown RBP eCLIP15.25■□□□□ 0.03
CD9-208ENST00000538834 AMHR2Q16671 573 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 TMEM119Q4V9L6 283 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 MCPH1Q8NEM0 835 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 SNX29Q8TEQ0 813 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 NLRP7Q8WX94 980 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 ZBED2Q9BTP6 218 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 PRDM12Q9H4Q4 367 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 DDX19AQ9NUU7 478 aaKnown RBP15.25■□□□□ 0.03
CD9-208ENST00000538834 TMEM161AQ9NX61 479 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 KIAA1024Q9UPX6 916 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 CITO14578 2027 aa15.25■□□□□ 0.03
CD9-208ENST00000538834 PDCD11Q14690 1871 aaKnown RBP15.25■□□□□ 0.03
CD9-208ENST00000538834 ADGRA3Q8IWK6 1321 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 VWA3AA6NCI4 1184 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 UPP2O95045 317 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 FGFR4P22455 802 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 NASPP49321 788 aaPredicted RBP15.24■□□□□ 0.03
CD9-208ENST00000538834 KRT79Q5XKE5 535 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 CDCA2Q69YH5 1023 aaPredicted RBP15.24■□□□□ 0.03
CD9-208ENST00000538834 FAM117BQ6P1L5 589 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 PADI6Q6TGC4 694 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 C1orf186Q6ZWK4 172 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 CMTR2Q8IYT2 770 aaKnown RBP15.24■□□□□ 0.03
CD9-208ENST00000538834 DAW1Q8N136 415 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 TGS1Q96RS0 853 aaKnown RBP15.24■□□□□ 0.03
CD9-208ENST00000538834 USP28Q96RU2 1077 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 CCSER1Q9C0I3 900 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 AGPAT5Q9NUQ2 364 aa15.24■□□□□ 0.03
CD9-208ENST00000538834 FBXO2Q9UK22 296 aaPredicted RBP15.24■□□□□ 0.03
CD9-208ENST00000538834 SRPRBQ9Y5M8 271 aaKnown RBP15.24■□□□□ 0.03
CD9-208ENST00000538834 E9PMD0 336 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 EOMESO95936 686 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 LONP1P36776 959 aaKnown RBP15.23■□□□□ 0.03
CD9-208ENST00000538834 MAPK7Q13164 816 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 SLC39A14Q15043 492 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 FAM187BQ17R55 369 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 UBXN11Q5T124 520 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 ECHDC2Q86YB7 292 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 RNF149Q8NC42 400 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 BSNDQ8WZ55 320 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 KCNN1Q92952 543 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 BHMT2Q9H2M3 363 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 GPRC5CQ9NQ84 441 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 LMCD1Q9NZU5 365 aa15.23■□□□□ 0.03
CD9-208ENST00000538834 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
CD9-208ENST00000538834 SRGAP2CP0DJJ0 459 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 SFPQP23246 707 aaKnown RBP eCLIP15.22■□□□□ 0.03
CD9-208ENST00000538834 SLC12A3P55017 1021 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 MBTD1Q05BQ5 628 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 PKP1Q13835 747 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 RINT1Q6NUQ1 792 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 PPP4R3CPQ6ZMV5 832 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 MRPL10Q7Z7H8 261 aaKnown RBP15.22■□□□□ 0.03
CD9-208ENST00000538834 SYT2Q8N9I0 419 aaPredicted RBP15.22■□□□□ 0.03
CD9-208ENST00000538834 NLRP4Q96MN2 994 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 YME1L1Q96TA2 773 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 C17orf80Q9BSJ5 609 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 CCDC113Q9H0I3 377 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 NT5C3AQ9H0P0 336 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 POLR3FQ9H1D9 316 aaPredicted RBP15.22■□□□□ 0.03
CD9-208ENST00000538834 FZD8Q9H461 694 aa15.22■□□□□ 0.03
CD9-208ENST00000538834 BMP2KQ9NSY1 1161 aaPredicted RBP15.22■□□□□ 0.03
CD9-208ENST00000538834 BLOC1S4Q9NUP1 217 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms