RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 IER5Q5VY09 327 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 SMYD4Q8IYR2 804 aaPredicted RBP19.03■□□□□ 0.64
CLN6-202ENST00000538696 BSNDQ8WZ55 320 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 MAP7D2Q96T17 732 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 SUCLA2Q9P2R7 463 aaPredicted RBP19.03■□□□□ 0.64
CLN6-202ENST00000538696 ODF2LQ9ULJ1 636 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 LTBP2Q14767 1821 aa19.03■□□□□ 0.64
CLN6-202ENST00000538696 SCN5AQ14524 2016 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 BECN2A8MW95 431 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 DCDC2CA8MYV0 355 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 AP5Z1O43299 807 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 VTNP04004 478 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 GLRA2P23416 452 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 NCAPHQ15003 741 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 RPAINQ86UA6 219 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 PSPC1Q8WXF1 523 aaKnown RBP19.02■□□□□ 0.64
CLN6-202ENST00000538696 KIFAP3Q92845 792 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 DRC1Q96MC2 740 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 DACH1Q9UI36 760 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 AKT3Q9Y243 479 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 GDAQ9Y2T3 454 aa19.02■□□□□ 0.64
CLN6-202ENST00000538696 FRMD3A2A2Y4 597 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 PPP1R3GB7ZBB8 358 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 GOLGA6L19H0YKK7 550 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 TBCAO75347 108 aaKnown RBP19.01■□□□□ 0.63
CLN6-202ENST00000538696 RHOBTB3O94955 611 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 CLTBP09497 229 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 DNM2P50570 870 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 ZNF131P52739 623 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 RBL2Q08999 1139 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 TMEM62Q0P6H9 643 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 CAPSQ13938 189 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 ZNF658Q5TYW1 1059 aaPredicted RBP19.01■□□□□ 0.63
CLN6-202ENST00000538696 KSR1Q8IVT5 923 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 PRPF31Q8WWY3 499 aaKnown RBP19.01■□□□□ 0.63
CLN6-202ENST00000538696 PPP1R16BQ96T49 567 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 EXOC1Q9NV70 894 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 TBX21Q9UL17 535 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 COL4A3BPQ9Y5P4 624 aa19.01■□□□□ 0.63
CLN6-202ENST00000538696 SFI1A8K8P3 1242 aa19■□□□□ 0.63
CLN6-202ENST00000538696 FAM13AO94988 1023 aa19■□□□□ 0.63
CLN6-202ENST00000538696 IDEP14735 1019 aa19■□□□□ 0.63
CLN6-202ENST00000538696 THPOP40225 353 aa19■□□□□ 0.63
CLN6-202ENST00000538696 GPC3P51654 580 aa19■□□□□ 0.63
CLN6-202ENST00000538696 MRPS6P82932 125 aaKnown RBP19■□□□□ 0.63
CLN6-202ENST00000538696 MGAT3Q09327 533 aa19■□□□□ 0.63
CLN6-202ENST00000538696 LAMTOR4Q0VGL1 99 aa19■□□□□ 0.63
CLN6-202ENST00000538696 TRAF7Q6Q0C0 670 aa19■□□□□ 0.63
CLN6-202ENST00000538696 UNC13DQ70J99 1090 aa19■□□□□ 0.63
CLN6-202ENST00000538696 RSPH3Q86UC2 560 aa19■□□□□ 0.63
CLN6-202ENST00000538696 RHPN2Q8IUC4 686 aa19■□□□□ 0.63
CLN6-202ENST00000538696 NME8Q8N427 588 aa19■□□□□ 0.63
CLN6-202ENST00000538696 CAGE1Q8TC20 777 aa19■□□□□ 0.63
CLN6-202ENST00000538696 CCDC47Q96A33 483 aaKnown RBP19■□□□□ 0.63
CLN6-202ENST00000538696 ZNF668Q96K58 619 aaPredicted RBP19■□□□□ 0.63
CLN6-202ENST00000538696 NOC4LQ9BVI4 516 aaKnown RBP19■□□□□ 0.63
CLN6-202ENST00000538696 DNAH12Q6ZR08 3092 aa19■□□□□ 0.63
CLN6-202ENST00000538696 SMTNL1A8MU46 457 aa19■□□□□ 0.63
CLN6-202ENST00000538696 IKBKBO14920 756 aa19■□□□□ 0.63
CLN6-202ENST00000538696 CAND2O75155 1236 aa19■□□□□ 0.63
CLN6-202ENST00000538696 GPR32O75388 356 aa19■□□□□ 0.63
CLN6-202ENST00000538696 RPLP2P05387 115 aaKnown RBP19■□□□□ 0.63
CLN6-202ENST00000538696 CTSHP09668 335 aa19■□□□□ 0.63
CLN6-202ENST00000538696 CKBP12277 381 aa19■□□□□ 0.63
CLN6-202ENST00000538696 PLS3P13797 630 aa19■□□□□ 0.63
CLN6-202ENST00000538696 COASYQ13057 564 aa19■□□□□ 0.63
CLN6-202ENST00000538696 MXD4Q14582 209 aaPredicted RBP19■□□□□ 0.63
CLN6-202ENST00000538696 SFR1Q86XK3 245 aa19■□□□□ 0.63
CLN6-202ENST00000538696 CCDC155Q8N6L0 562 aa19■□□□□ 0.63
CLN6-202ENST00000538696 MED15Q96RN5 788 aa19■□□□□ 0.63
CLN6-202ENST00000538696 HTATIP2Q9BUP3 242 aa19■□□□□ 0.63
CLN6-202ENST00000538696 ADAMTS10Q9H324 1103 aa19■□□□□ 0.63
CLN6-202ENST00000538696 ZHX3Q9H4I2 956 aa19■□□□□ 0.63
CLN6-202ENST00000538696 PARVGQ9HBI0 331 aa19■□□□□ 0.63
CLN6-202ENST00000538696 PANK4Q9NVE7 773 aa19■□□□□ 0.63
CLN6-202ENST00000538696 TRPV2Q9Y5S1 764 aa19■□□□□ 0.63
CLN6-202ENST00000538696 CDY2AQ9Y6F7 541 aa19■□□□□ 0.63
CLN6-202ENST00000538696 UMODL1Q5DID0 1318 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 PVALEFA0A1B0GWK0 134 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 ASAP2O43150 1006 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 PEX3P56589 373 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 MYL5Q02045 173 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 KIZQ2M2Z5 673 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 FAM26DQ5JW98 314 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 ZNF618Q5T7W0 954 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 KLHL10Q6JEL2 608 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 CCDC65Q8IXS2 484 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 ANP32BQ92688 251 aaKnown RBP18.99■□□□□ 0.63
CLN6-202ENST00000538696 HPS3Q969F9 1004 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 NLRP4Q96MN2 994 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 C17orf75Q9HAS0 396 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 CTNND2Q9UQB3 1225 aa18.99■□□□□ 0.63
CLN6-202ENST00000538696 ADGRA3Q8IWK6 1321 aa18.98■□□□□ 0.63
CLN6-202ENST00000538696 A0A087WZ62 844 aa18.98■□□□□ 0.63
CLN6-202ENST00000538696 RBAK-RBAKDNI3L0D1 243 aa18.98■□□□□ 0.63
CLN6-202ENST00000538696 CHRNA1P02708 482 aa18.98■□□□□ 0.63
CLN6-202ENST00000538696 GAP43P17677 238 aa18.98■□□□□ 0.63
CLN6-202ENST00000538696 ERCC5P28715 1186 aaPredicted RBP18.98■□□□□ 0.63
CLN6-202ENST00000538696 NAMPTP43490 491 aa18.98■□□□□ 0.63
CLN6-202ENST00000538696 NLRP11P59045 1033 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms